UCNE: HOXD_Elvira
(id = 21278)

General information about the entry
Entry location:intergenic
Position:chr2:176551485-176551786
Length:302 nt
Sequence:HOXD_Elvira.fasta
Upstream gene:ATP5G3
Downstream gene:KIAA1715
Paralogs:
Ultraconserved Genomic Regulatory Block (UGRB): HOXD_cluster: chr2:175967909-178084536
External links:
CONDOR database:CRCNE00010505;
VISTA Enhancer Browser:
UCE (Bejerano et al. 2004):
Other browsers view:[Ensembl] [ECR browser] [Ancora]
Conservation in chicken:
Chicken (galGal3): Region: chr7:17603557-17603857        Identity: >95%
Conservation in other species:
Mouse (mm10):
Region #1:   chr2:74297016-74297317   Identity: 97.35%    E-value: 6.1e-47   Bit-score: 193.3

Armadillo (dasNov1):
Region #1:   scaffold_65:167020-167322   Identity: 97.69%    E-value: 2.1e-42   Bit-score: 178.4

Opossum (monDom5):
Region #1:   chr4:186886129-186886430   Identity: 96.69%    E-value: 7.7e-40   Bit-score: 170.2

Platypus (ornAna1):
Region #1:   Ultra514:14388539-14388836   Identity: 97.99%    E-value: 5.5e-49   Bit-score: 199.7

Zebra_finch (taeGut1):
Region #1:   chr7:16830019-16830316   Identity: 98.32%    E-value: 3.9e-47   Bit-score: 192.9

Lizard (anoCar2):
Region #1:   chrUn_AAWZ02036986:70-380   Identity: 90.68%    E-value: 3.1e-44   Bit-score: 183.7
This UCNE has 1 paralogous region in Lizard

Painted_turtle (chrPic1):
Region #1:   JH584712:1833845-1834145   Identity: 97.67%    E-value: 1.3e-45   Bit-score: 188.9

Xenopus (xenTro3):
Region #1:   GL172799:884346-884637   Identity: 95.22%    E-value: 3.8e-42   Bit-score: 176.6

Fugu (fr2):
Region #1:   chrUn:173300005-173300284   Identity: 77.62%    E-value: 5.5e-34   Bit-score: 144.1

Medaka (oryLat2):
Region #1:   chr21:24507800-24508078   Identity: 77.27%    E-value: 4.7e-29   Bit-score: 127.8

Stickleback (gasAcu1):
Region #1:   chrXVI:9873626-9873880   Identity: 80.86%    E-value: 2.6e-32   Bit-score: 138.7

Tetraodon (tetNig2):
Region #1:   chr2:13485476-13485755   Identity: 78.32%    E-value: 4.2e-34   Bit-score: 144.4

Zebrafish (danRer7):
Region #1:   chr9:2114885-2115103   Identity: 80.37%    E-value: 1.5e-17   Bit-score: 90.4

Lamprey (petMar1):
Ciona_intestinalis (ci2):
Sea_urchin (strPur2):
Lancelet (braFlo1):