UCNE: PAX1_Victor
(id = 22105)

General information about the entry
Entry location:intron
Position:chr20:21363076-21363291
Length:216 nt
Sequence:PAX1_Victor.fasta
Overlapping gene:XRN2
Paralogs:
Ultraconserved Genomic Regulatory Block (UGRB): PAX1_cluster: chr20:20473431-21363291
External links:
CONDOR database:CRCNE00011243;
VISTA Enhancer Browser:
UCE (Bejerano et al. 2004):
Other browsers view:[Ensembl] [ECR browser] [Ancora]
Conservation in chicken:
Chicken (galGal3): Region: chr3:3471109-3471324        Identity: >95%
Conservation in other species:
Mouse (mm10):
Region #1:   chr2:147069236-147069451   Identity: 95.83%    E-value: 1e-53   Bit-score: 215.3

Armadillo (dasNov1):
Region #1:   scaffold_6157:14999-15214   Identity: 99.07%    E-value: 3.3e-52   Bit-score: 210.5

Opossum (monDom5):
Region #1:   chr1:600384736-600384951   Identity: 97.69%    E-value: 4e-52   Bit-score: 210.5

Platypus (ornAna1):
Region #1:   chr1:35872926-35873141   Identity: 96.3%    E-value: 1.1e-50   Bit-score: 204.9

Zebra_finch (taeGut1):
Region #1:   chr3:29238359-29238574   Identity: 93.52%    E-value: 7.6e-47   Bit-score: 191.4

Lizard (anoCar2):
Region #1:   chr4:81365282-81365498   Identity: 91.71%    E-value: 6.1e-47   Bit-score: 192.3

Painted_turtle (chrPic1):
Region #1:   JH584522:11047383-11047598   Identity: 96.3%    E-value: 1.6e-49   Bit-score: 201.4

Xenopus (xenTro3):
Region #1:   GL173122:364234-364446   Identity: 91.55%    E-value: 1.4e-43   Bit-score: 180.8

Fugu (fr2):
Region #1:   chrUn:65977192-65977399   Identity: 79.43%    E-value: 1.1e-33   Bit-score: 142.5
Region #2:   chrUn:192526612-192526787   Identity: 64.32%    E-value: 0.000000000057   Bit-score: 67.1

Medaka (oryLat2):
Region #1:   chr20:12257950-12258155   Identity: 78.74%    E-value: 5.3e-31   Bit-score: 133.8
Region #2:   chr24:16268253-16268457   Identity: 73.02%    E-value: 1.2e-24   Bit-score: 112.7

Stickleback (gasAcu1):
Region #1:   chrXV:3901639-3901845   Identity: 80.77%    E-value: 1.9e-34   Bit-score: 145.3

Tetraodon (tetNig2):
Region #1:   chr10:3345214-3345417   Identity: 79.02%    E-value: 2.1e-32   Bit-score: 138.4

Zebrafish (danRer7):
Region #1:   chr17:42206989-42207196   Identity: 75.24%    E-value: 6.7e-25   Bit-score: 114.4
Region #2:   chr20:49065790-49065915   Identity: 75.59%    E-value: 0.000000000038   Bit-score: 68.7

Lamprey (petMar1):
Ciona_intestinalis (ci2):
Sea_urchin (strPur2):
Lancelet (braFlo1):