UCNE: chr20_Charlie
(id = 22276)

General information about the entry
Entry location:intron
Position:chr20:42644017-42644322
Length:306 nt
Sequence:chr20_Charlie.fasta
Overlapping gene:TOX2
Paralogs:chr8:59813872-59814084: TOX_Charlie;
External links:
CONDOR database:
VISTA Enhancer Browser:
UCE (Bejerano et al. 2004):
Other browsers view:[Ensembl] [ECR browser] [Ancora]
Conservation in chicken:
Chicken (galGal3): Region: chr20:2329841-2330146        Identity: >95%
This UCNE has 1 paralogous region in Chicken

Conservation in other species:
Mouse (mm10):
Region #1:   chr2:163284960-163285262   Identity: 96.71%    E-value: 3.9e-65   Bit-score: 253.8
This UCNE has 1 paralogous region in Mouse

Armadillo (dasNov1):
This UCNE has 1 paralogous region in Armadillo

Opossum (monDom5):
Region #1:   chr1:386538987-386539288   Identity: 93.73%    E-value: 2.4e-59   Bit-score: 235
This UCNE has 2 paralogous regions in Opossum

Platypus (ornAna1):
Region #1:   Ultra337:4320862-4321165   Identity: 95.07%    E-value: 3.4e-66   Bit-score: 256.9
This UCNE has 1 paralogous region in Platypus

Zebra_finch (taeGut1):
Region #1:   chr20:2816484-2816787   Identity: 94.08%    E-value: 1e-62   Bit-score: 244.6
This UCNE has 1 paralogous region in Zebra_finch

Lizard (anoCar2):
Region #1:   chr4:136057233-136057536   Identity: 94.41%    E-value: 2.7e-68   Bit-score: 263.7
This UCNE has 1 paralogous region in Lizard

Painted_turtle (chrPic1):
Region #1:   JH584656:10849031-10849334   Identity: 95.07%    E-value: 1.7e-64   Bit-score: 251.6
This UCNE has 1 paralogous region in Painted_turtle

Xenopus (xenTro3):
Region #1:   GL172674:2816932-2817247   Identity: 78.86%    E-value: 2.1e-39   Bit-score: 167.5
This UCNE has 1 paralogous region in Xenopus

Fugu (fr2):
Region #1:   chrUn:60712825-60713058   Identity: 80.67%    E-value: 2e-39   Bit-score: 162.2
Region #2:   chrUn:149043173-149043450   Identity: 73.36%    E-value: 1.8e-36   Bit-score: 152.3

Medaka (oryLat2):
Region #1:   chr5:10470182-10470481   Identity: 75.67%    E-value: 8.8e-40   Bit-score: 163.5
Region #2:   chr7:8936107-8936344   Identity: 77.69%    E-value: 7.7e-33   Bit-score: 140.4

Stickleback (gasAcu1):
Region #1:   chrXVII:4673457-4673754   Identity: 77.59%    E-value: 1.4e-44   Bit-score: 179.5
Region #2:   chrXII:8722107-8722342   Identity: 78.33%    E-value: 1.2e-35   Bit-score: 149.8

Tetraodon (tetNig2):
Region #1:   chr11:4089943-4090235   Identity: 73.58%    E-value: 1.4e-35   Bit-score: 149.4

Zebrafish (danRer7):
Region #1:   chr6:57863051-57863349   Identity: 70.23%    E-value: 7.8e-27   Bit-score: 121.3

Lamprey (petMar1):
Ciona_intestinalis (ci2):
Sea_urchin (strPur2):
Lancelet (braFlo1):