General information about the entry |
Entry location: | intergenic |
Position: | chr20:51380163-51380450  |
Length: | 288 nt |
Sequence: | TSHZ2_Poseidon.fasta |
Upstream gene: | ZFP64 |
Downstream gene: | TSHZ2 |
Paralogs: | chr18:72822536-72822716: TSHZ1_Poseidon; chr19:31998928-31999078: TSHZ3_Poseidon;
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Ultraconserved Genomic Regulatory Block (UGRB): |
TSHZ2_cluster: chr20:50980751-52105849  |
External links: |
CONDOR database: | CRCNE00008744; |
VISTA Enhancer Browser: | |
UCE (Bejerano et al. 2004): | |
Other browsers view: | [Ensembl]
[ECR browser]
[Ancora]
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Conservation in chicken: |
Chicken (galGal3): | Region: chr20:12866358-12866645        Identity: >95%This UCNE has 2 paralogous regions in Chicken
Paralog #1:   chr2:93796531-93796822   Identity: 68.12%
   E-value: 1e-19   Bit-score: 101.5 |
Paralog #2:   chr11:10030878-10031027   Identity: 73.68%
   E-value: 0.0000000047   Bit-score: 66.1 |
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Conservation in other species: |
Mouse (mm10): | Region #1:   chr2:169445425-169445710   Identity: 92.31%
   E-value: 1.4e-58   Bit-score: 232 |
This UCNE has 2 paralogous regions in Mouse
Paralog #1:   chr18:84164154-84164307   Identity: 75.97%
   E-value: 0.000000000000048   Bit-score: 84 |
Paralog #2:   chr7:36537836-36537985   Identity: 73.68%
   E-value: 0.0000000028   Bit-score: 68.2 |
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Armadillo (dasNov1): | Region #1:   scaffold_1666:19904-20190   Identity: 95.82%
   E-value: 2.2e-62   Bit-score: 244.7 |
This UCNE has 1 paralogous region in Armadillo
Paralog #1:   scaffold_94730:6875-7024   Identity: 73.68%
   E-value: 0.0000000074   Bit-score: 66.9 |
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Opossum (monDom5): | Region #1:   chr1:492586299-492586584   Identity: 98.25%
   E-value: 9.6e-65   Bit-score: 252.8 |
This UCNE has 2 paralogous regions in Opossum
Paralog #1:   chr3:303380015-303380284   Identity: 68.48%
   E-value: 8.9e-18   Bit-score: 96.8 |
Paralog #2:   chr1:429930817-429930966   Identity: 73.68%
   E-value: 0.000000019   Bit-score: 65.8 |
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Platypus (ornAna1): | Region #1:   Ultra516:4007035-4007320   Identity: 96.15%
   E-value: 6.4e-64   Bit-score: 249.2 |
This UCNE has 2 paralogous regions in Platypus
Paralog #1:   Contig33635:3671-3856   Identity: 77.89%
   E-value: 1.7e-19   Bit-score: 101.6 |
Paralog #2:   Ultra517:3228382-3228531   Identity: 73.03%
   E-value: 0.0000000072   Bit-score: 66.3 |
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Zebra_finch (taeGut1): | Region #1:   chr20:14083771-14084056   Identity: 96.5%
   E-value: 1.4e-62   Bit-score: 244.1 |
This UCNE has 2 paralogous regions in Zebra_finch
Paralog #1:   chr2:96861288-96861549   Identity: 69.78%
   E-value: 2.3e-18   Bit-score: 97.2 |
Paralog #2:   chr11:15625888-15626037   Identity: 73.68%
   E-value: 0.0000000054   Bit-score: 66.1 |
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Lizard (anoCar2): | Region #1:   chrUn_GL343226:862204-862489   Identity: 95.45%
   E-value: 2.2e-65   Bit-score: 253.9 |
This UCNE has 2 paralogous regions in Lizard
Paralog #1:   chr4:49700533-49700720   Identity: 78.53%
   E-value: 1e-21   Bit-score: 108.9 |
Paralog #2:   chrUn_GL343509:3978-4114   Identity: 74.82%
   E-value: 0.0000000029   Bit-score: 67.5 |
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Painted_turtle (chrPic1): | Region #1:   JH584481:748976-749261   Identity: 96.85%
   E-value: 4.4e-63   Bit-score: 246.8 |
This UCNE has 2 paralogous regions in Painted_turtle
Paralog #1:   JH584442:8957237-8957429   Identity: 78.28%
   E-value: 2e-20   Bit-score: 105.1 |
Paralog #2:   JH584557:13070314-13070463   Identity: 73.68%
   E-value: 0.0000000073   Bit-score: 66.7 |
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Xenopus (xenTro3): | Region #1:   GL172784:2119221-2119499   Identity: 87.14%
   E-value: 4.6e-47   Bit-score: 192.8 |
This UCNE has 1 paralogous region in Xenopus
Paralog #1:   GL172730:1616666-1616815   Identity: 72.37%
   E-value: 0.000000053   Bit-score: 63.1 |
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Fugu (fr2): | Region #1:   chrUn:247667104-247667402   Identity: 77.59%
   E-value: 6.6e-45   Bit-score: 180.3 |
This UCNE has 3 paralogous regions in Fugu
Paralog #1:   chrUn:203589025-203589206   Identity: 75.68%
   E-value: 4.5e-23   Bit-score: 107.8 |
Paralog #2:   chrUn:207611057-207611239   Identity: 76.22%
   E-value: 3.7e-22   Bit-score: 104.7 |
Paralog #3:   chrUn:189707225-189707368   Identity: 71.23%
   E-value: 0.000000000047   Bit-score: 67.8 |
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Medaka (oryLat2): | Region #1:   chr7:25042554-25042852   Identity: 78.93%
   E-value: 6.1e-44   Bit-score: 177.2 |
This UCNE has 3 paralogous regions in Medaka
Paralog #1:   ultracontig182:2585761-2585940   Identity: 75.27%
   E-value: 1.5e-21   Bit-score: 102.8 |
Paralog #2:   chr11:6620904-6621086   Identity: 75.14%
   E-value: 9.6e-20   Bit-score: 96.8 |
Paralog #3:   chr3:35559068-35559214   Identity: 70.47%
   E-value: 0.000000000093   Bit-score: 67 |
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Stickleback (gasAcu1): | Region #1:   chrXII:14601716-14601984   Identity: 81.41%
   E-value: 1.2e-44   Bit-score: 179.6 |
This UCNE has 3 paralogous regions in Stickleback
Paralog #1:   chrXX:4700553-4700732   Identity: 75.96%
   E-value: 2.3e-22   Bit-score: 105.6 |
Paralog #2:   chrX:5461649-5461831   Identity: 74.59%
   E-value: 1.4e-20   Bit-score: 99.7 |
Paralog #3:   chrII:1678430-1678577   Identity: 71.33%
   E-value: 0.000000000025   Bit-score: 68.9 |
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Tetraodon (tetNig2): | Region #1:   chr9:9833886-9834170   Identity: 80.35%
   E-value: 2.4e-46   Bit-score: 185 |
This UCNE has 3 paralogous regions in Tetraodon
Paralog #1:   chrUn_random:72061226-72061405   Identity: 75.96%
   E-value: 7.8e-23   Bit-score: 106.9 |
Paralog #2:   chr21:2079764-2079946   Identity: 76.22%
   E-value: 5.6e-22   Bit-score: 104.1 |
Paralog #3:   chrUn_random:39841339-39841482   Identity: 71.23%
   E-value: 0.000000000057   Bit-score: 67.5 |
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Zebrafish (danRer7): | Region #1:   chr23:38687774-38688051   Identity: 75%
   E-value: 2.4e-31   Bit-score: 136.2 |
This UCNE has 2 paralogous regions in Zebrafish
Paralog #1:   chr19:21779503-21779680   Identity: 78.45%
   E-value: 4.9e-20   Bit-score: 98.6 |
Paralog #2:   chr7:47420364-47420506   Identity: 73.1%
   E-value: 0.00000000054   Bit-score: 65.3 |
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Lamprey (petMar1): |
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Ciona_intestinalis (ci2): |
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Sea_urchin (strPur2): |
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Lancelet (braFlo1): |
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