UCNE: RARB_Lolita
(id = 23376)

General information about the entry
Entry location:intergenic
Position:chr3:25333095-25333307
Length:213 nt
Sequence:RARB_Lolita.fasta
Upstream gene:THRB
Downstream gene:RARB
Paralogs:
Ultraconserved Genomic Regulatory Block (UGRB): RARB_cluster: chr3:25322831-25478042
External links:
CONDOR database:
VISTA Enhancer Browser:
UCE (Bejerano et al. 2004):
Other browsers view:[Ensembl] [ECR browser] [Ancora]
Conservation in chicken:
Chicken (galGal3): Region: chr2:37682941-37683153        Identity: >95%
Conservation in other species:
Mouse (mm10):
Region #1:   chr14:16733602-16733814   Identity: 92.49%    E-value: 5.5e-43   Bit-score: 179.7

Armadillo (dasNov1):
Region #1:   scaffold_3826:89330-89542   Identity: 100%    E-value: 1.7e-44   Bit-score: 184.8

Opossum (monDom5):
Region #1:   chr8:285564494-285564706   Identity: 93.43%    E-value: 2.4e-41   Bit-score: 174.7

Platypus (ornAna1):
Region #1:   Ultra51:862000-862211   Identity: 97.17%    E-value: 5.2e-45   Bit-score: 185.9

Zebra_finch (taeGut1):
Region #1:   chr2:57898795-57899005   Identity: 97.16%    E-value: 1.3e-45   Bit-score: 187.3

Lizard (anoCar2):
Region #1:   chrUn_GL343380:993424-993632   Identity: 93.3%    E-value: 2.4e-43   Bit-score: 180.3

Painted_turtle (chrPic1):
Region #1:   JH584682:9248551-9248762   Identity: 96.7%    E-value: 2e-44   Bit-score: 184.4

Xenopus (xenTro3):
Region #1:   GL190211:368-580   Identity: 90.14%    E-value: 4.1e-38   Bit-score: 162.7
This UCNE has 1 paralogous region in Xenopus

Fugu (fr2):
Region #1:   chrUn:334231334-334231545   Identity: 71.36%    E-value: 1.8e-23   Bit-score: 108.7

Medaka (oryLat2):
Stickleback (gasAcu1):
Region #1:   chrX:12311957-12312161   Identity: 75.12%    E-value: 2.5e-26   Bit-score: 118.3

Tetraodon (tetNig2):
Zebrafish (danRer7):
Lamprey (petMar1):
Ciona_intestinalis (ci2):
Sea_urchin (strPur2):
Lancelet (braFlo1):