General information about the entry |
Entry location: | intergenic |
Position: | chr3:147049528-147050017  |
Length: | 490 nt |
Sequence: | ZIC1_Evelyn.fasta |
Upstream gene: | PLSCR5 |
Downstream gene: | ZIC4 |
Paralogs: | |
Ultraconserved Genomic Regulatory Block (UGRB): |
ZIC1_cluster: chr3:146465402-148087313  |
External links: |
CONDOR database: | CRCNE00005719; |
VISTA Enhancer Browser: | hs213; |
UCE (Bejerano et al. 2004): | uc.128 http://users.soe.ucsc.edu/~jill/ultra.html |
Other browsers view: | [Ensembl]
[ECR browser]
[Ancora]
|
Conservation in chicken: |
Chicken (galGal3): | Region: chr9:12940787-12941280        Identity: >95%
|
Conservation in other species: |
Mouse (mm10): | Region #1:   chr9:91446806-91447294   Identity: 97.35%
   E-value: 1.4e-78   Bit-score: 299.2 |
|
Armadillo (dasNov1): | Region #1:   scaffold_4775:23700-24189   Identity: 97.35%
   E-value: 4.8e-73   Bit-score: 280.9 |
|
Opossum (monDom5): | Region #1:   chr7:211845040-211845529   Identity: 97.96%
   E-value: 1e-67   Bit-score: 263.5 |
|
Platypus (ornAna1): | Region #1:   chr1:38731465-38731952   Identity: 97.54%
   E-value: 8e-88   Bit-score: 329.4 |
|
Zebra_finch (taeGut1): | Region #1:   chr9:13405553-13406042   Identity: 97.14%
   E-value: 2.4e-81   Bit-score: 307.2 |
|
Lizard (anoCar2): | Region #1:   chrUn_GL343435:772778-773267   Identity: 94.69%
   E-value: 1.1e-84   Bit-score: 318.8 |
|
Painted_turtle (chrPic1): |
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Xenopus (xenTro3): | Region #1:   GL172920:1109269-1109678   Identity: 94.88%
   E-value: 1.2e-62   Bit-score: 245.3 |
|
Fugu (fr2): | Region #1:   chrUn:210597238-210597588   Identity: 79.38%
   E-value: 5.7e-47   Bit-score: 187.9 |
|
Medaka (oryLat2): | Region #1:   chr20:16795702-16796057   Identity: 69.7%
   E-value: 1.2e-28   Bit-score: 127.1 |
|
Stickleback (gasAcu1): | Region #1:   chrXXI:8392416-8392805   Identity: 71.71%
   E-value: 2.3e-35   Bit-score: 149.6 |
|
Tetraodon (tetNig2): | Region #1:   chr6:4392761-4393141   Identity: 76.88%
   E-value: 9.8e-46   Bit-score: 183.8 |
|
Zebrafish (danRer7): | Region #1:   chr24:5082963-5083414   Identity: 74.05%
   E-value: 1e-34   Bit-score: 148.1 |
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Lamprey (petMar1): |
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Ciona_intestinalis (ci2): |
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Sea_urchin (strPur2): |
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Lancelet (braFlo1): |
|