UCNE: ZIC1_Figaro
(id = 24572)

General information about the entry
Entry location:intergenic
Position:chr3:147096838-147097037
Length:200 nt
Sequence:ZIC1_Figaro.fasta
Upstream gene:PLSCR5
Downstream gene:ZIC4
Paralogs:
Ultraconserved Genomic Regulatory Block (UGRB): ZIC1_cluster: chr3:146465402-148087313
External links:
CONDOR database:
VISTA Enhancer Browser:
UCE (Bejerano et al. 2004):
Other browsers view:[Ensembl] [ECR browser] [Ancora]
Conservation in chicken:
Chicken (galGal3): Region: chr9:12979474-12979673        Identity: >95%
Conservation in other species:
Mouse (mm10):
Region #1:   chr9:91395986-91396185   Identity: 97%    E-value: 1.4e-43   Bit-score: 181.6

Armadillo (dasNov1):
Region #1:   scaffold_8965:43054-43253   Identity: 99%    E-value: 2.4e-42   Bit-score: 177.6

Opossum (monDom5):
Region #1:   chr7:211776134-211776333   Identity: 95%    E-value: 9.9e-42   Bit-score: 175.8

Platypus (ornAna1):
Zebra_finch (taeGut1):
Region #1:   chr9:13445609-13445808   Identity: 94.5%    E-value: 6.9e-43   Bit-score: 178.2

Lizard (anoCar2):
Region #1:   chr3:20045210-20045408   Identity: 91.96%    E-value: 1.4e-41   Bit-score: 174.3

Painted_turtle (chrPic1):
Region #1:   JH584745:3627868-3628067   Identity: 93.5%    E-value: 3.4e-41   Bit-score: 173.6
This UCNE has 1 paralogous region in Painted_turtle

Xenopus (xenTro3):
Region #1:   GL172920:1054620-1054818   Identity: 90.45%    E-value: 2.5e-37   Bit-score: 160

Fugu (fr2):
Medaka (oryLat2):
Stickleback (gasAcu1):
Tetraodon (tetNig2):
Zebrafish (danRer7):
Lamprey (petMar1):
Ciona_intestinalis (ci2):
Sea_urchin (strPur2):
Lancelet (braFlo1):