UCNE: SHOX2_Joshua_1
(id = 24724)

General information about the entry
Entry location:intron
Position:chr3:158026060-158026456
Length:397 nt
Sequence:SHOX2_Joshua_1.fasta
Overlapping gene:RSRC1
Paralogs:
Ultraconserved Genomic Regulatory Block (UGRB): SHOX2_cluster: chr3:157574121-158246256
External links:
CONDOR database:CRCNE00005668; CRCNE00005667; CRCNE00005666;
VISTA Enhancer Browser:hs257;
UCE (Bejerano et al. 2004):uc.132 http://users.soe.ucsc.edu/~jill/ultra.html
Other browsers view:[Ensembl] [ECR browser] [Ancora]
Conservation in chicken:
Chicken (galGal3): Region: chr9:24102641-24103037        Identity: >95%
Conservation in other species:
Mouse (mm10):
Region #1:   chr3:67191244-67191639   Identity: 98.99%    E-value: 2.4e-81   Bit-score: 308

Armadillo (dasNov1):
Opossum (monDom5):
Region #1:   chr7:243516669-243517065   Identity: 98.24%    E-value: 5.7e-74   Bit-score: 283.9

Platypus (ornAna1):
Region #1:   Contig1000:45584-45988   Identity: 94.57%    E-value: 3.6e-75   Bit-score: 287

Zebra_finch (taeGut1):
Region #1:   chr9:25864593-25864989   Identity: 91.44%    E-value: 3e-70   Bit-score: 270

Lizard (anoCar2):
Region #1:   chr3:14301772-14302168   Identity: 97.48%    E-value: 5.4e-84   Bit-score: 316.2

Painted_turtle (chrPic1):
Xenopus (xenTro3):
Region #1:   GL172686:1837429-1837825   Identity: 94.46%    E-value: 9e-74   Bit-score: 282

Fugu (fr2):
Region #1:   chrUn:34554928-34555262   Identity: 61.11%    E-value: 2.8e-16   Bit-score: 85.6

Medaka (oryLat2):
Region #1:   chr13:14836612-14836683   Identity: 86.11%    E-value: 0.00000091   Bit-score: 54.2
Region #2:   chr13:14836186-14836252   Identity: 86.76%    E-value: 0.000015   Bit-score: 50.1

Stickleback (gasAcu1):
Region #1:   chrI:8756680-8756875   Identity: 67.86%    E-value: 0.00000000000032   Bit-score: 75.7

Tetraodon (tetNig2):
Region #1:   chrUn_random:74147843-74148194   Identity: 59.32%    E-value: 0.000000000024   Bit-score: 69.2

Zebrafish (danRer7):
Region #1:   chr15:2271826-2272093   Identity: 63.9%    E-value: 0.00000022   Bit-score: 57

Lamprey (petMar1):
Ciona_intestinalis (ci2):
Sea_urchin (strPur2):
Lancelet (braFlo1):