UCNE: SHOX2_Ryan
(id = 24729)

General information about the entry
Entry location:intron
Position:chr3:158103460-158103797
Length:338 nt
Sequence:SHOX2_Ryan.fasta
Overlapping gene:RSRC1
Paralogs:
Ultraconserved Genomic Regulatory Block (UGRB): SHOX2_cluster: chr3:157574121-158246256
External links:
CONDOR database:CRCNE00005622; CRCNE00005596; CRCNE00005621;
VISTA Enhancer Browser:
UCE (Bejerano et al. 2004):
Other browsers view:[Ensembl] [ECR browser] [Ancora]
Conservation in chicken:
Chicken (galGal3): Region: chr9:24086763-24087100        Identity: >95%
Conservation in other species:
Mouse (mm10):
Region #1:   chr3:67221666-67222003   Identity: 95.27%    E-value: 2.5e-58   Bit-score: 231.3

Armadillo (dasNov1):
Region #1:   scaffold_178832:3763-4100   Identity: 98.52%    E-value: 4.1e-58   Bit-score: 230.8

Opossum (monDom5):
Region #1:   chr7:243472551-243472888   Identity: 94.97%    E-value: 7.2e-52   Bit-score: 210.3

Platypus (ornAna1):
Region #1:   Contig1000:94466-94803   Identity: 96.15%    E-value: 1.9e-62   Bit-score: 244.5

Zebra_finch (taeGut1):
Region #1:   chr9:25848805-25849143   Identity: 87.91%    E-value: 5.3e-49   Bit-score: 199.2

Lizard (anoCar2):
Region #1:   chr3:14268040-14268376   Identity: 94.67%    E-value: 2.7e-64   Bit-score: 250.6

Painted_turtle (chrPic1):
Region #1:   JH584515:5169036-5169373   Identity: 96.75%    E-value: 7.6e-61   Bit-score: 239.6

Xenopus (xenTro3):
Region #1:   GL172686:1814066-1814396   Identity: 86.71%    E-value: 1.5e-46   Bit-score: 191.3

Fugu (fr2):
Region #1:   chrUn:34567517-34567843   Identity: 70.64%    E-value: 1.1e-33   Bit-score: 143.3

Medaka (oryLat2):
Region #1:   chr13:14853612-14853911   Identity: 74.67%    E-value: 6e-33   Bit-score: 140.9

Stickleback (gasAcu1):
Region #1:   chrI:8743805-8744113   Identity: 73.46%    E-value: 2e-33   Bit-score: 142.6

Tetraodon (tetNig2):
Region #1:   chrUn_random:74136173-74136509   Identity: 69.73%    E-value: 2e-32   Bit-score: 139

Zebrafish (danRer7):
Region #1:   chr15:2298325-2298640   Identity: 72.5%    E-value: 3.1e-22   Bit-score: 106.2

Lamprey (petMar1):
Ciona_intestinalis (ci2):
Sea_urchin (strPur2):
Lancelet (braFlo1):