UCNE: SOX2_Cameron
(id = 24969)

General information about the entry
Entry location:intergenic
Position:chr3:180892217-180892916
Length:700 nt
Sequence:SOX2_Cameron.fasta
Upstream gene:DNAJC19
Downstream gene:SOX2OT
Paralogs:chr13:112063188-112063435: SOX1_Cameron;
Ultraconserved Genomic Regulatory Block (UGRB): SOX2_cluster: chr3:180436793-182314792
External links:
CONDOR database:CRCNE00001807; CRCNE00001808;
VISTA Enhancer Browser:
UCE (Bejerano et al. 2004):
Other browsers view:[Ensembl] [ECR browser] [Ancora]
Conservation in chicken:
Chicken (galGal3): Region: chr9:18201685-18202384        Identity: >95%
This UCNE has 1 paralogous region in Chicken

Conservation in other species:
Mouse (mm10):
Region #1:   chr3:34196122-34196817   Identity: 95.14%    E-value: 1.2e-153   Bit-score: 549.1
This UCNE has 1 paralogous region in Mouse

Armadillo (dasNov1):
Region #1:   scaffold_33855:47879-48578   Identity: 99.43%    E-value: 7.5e-159   Bit-score: 566.4

Opossum (monDom5):
Region #1:   chr7:204293847-204294547   Identity: 96.29%    E-value: 1.6e-146   Bit-score: 525.8
This UCNE has 1 paralogous region in Opossum

Platypus (ornAna1):
Region #1:   Ultra347:584628-585327   Identity: 98.86%    E-value: 2.1e-161   Bit-score: 574.4
This UCNE has 1 paralogous region in Platypus

Zebra_finch (taeGut1):
Region #1:   chr9:19551833-19552532   Identity: 98.14%    E-value: 2.6e-151   Bit-score: 540.1
This UCNE has 1 paralogous region in Zebra_finch

Lizard (anoCar2):
Region #1:   chr3:1405426-1406142   Identity: 94.14%    E-value: 1.9e-149   Bit-score: 534.4
This UCNE has 1 paralogous region in Lizard

Painted_turtle (chrPic1):
Region #1:   JH584502:3301865-3302564   Identity: 98%    E-value: 3.8e-153   Bit-score: 547.3
This UCNE has 1 paralogous region in Painted_turtle

Xenopus (xenTro3):
Region #1:   GL172881:1341893-1342559   Identity: 87.43%    E-value: 6.8e-113   Bit-score: 412.8
This UCNE has 2 paralogous regions in Xenopus

Fugu (fr2):
Region #1:   chrUn:303433454-303433922   Identity: 65.75%    E-value: 2.5e-33   Bit-score: 143.1
This UCNE has 1 paralogous region in Fugu

Medaka (oryLat2):
Region #1:   chr4:19975179-19975644   Identity: 67.38%    E-value: 2.6e-33   Bit-score: 143.2
This UCNE has 1 paralogous region in Medaka

Stickleback (gasAcu1):
Region #1:   chrVIII:6078299-6078777   Identity: 66.53%    E-value: 5.6e-36   Bit-score: 152.1
This UCNE has 1 paralogous region in Stickleback

Tetraodon (tetNig2):
Region #1:   chr1:21720397-21720892   Identity: 64.13%    E-value: 4e-31   Bit-score: 135.8
This UCNE has 1 paralogous region in Tetraodon

Zebrafish (danRer7):
Region #1:   chr22:40499052-40499713   Identity: 72.25%    E-value: 1.3e-70   Bit-score: 268
This UCNE has 2 paralogous regions in Zebrafish

Lamprey (petMar1):
Ciona_intestinalis (ci2):
Sea_urchin (strPur2):
Lancelet (braFlo1):