UCNE: PRDM8_Lucia
(id = 25725)

General information about the entry
Entry location:intergenic
Position:chr4:80334700-80335013
Length:314 nt
Sequence:PRDM8_Lucia.fasta
Upstream gene:GK2
Downstream gene:GDEP
Paralogs:
Ultraconserved Genomic Regulatory Block (UGRB): PRDM8_cluster: chr4:79908658-80827315
External links:
CONDOR database:
VISTA Enhancer Browser:
UCE (Bejerano et al. 2004):
Other browsers view:[Ensembl] [ECR browser] [Ancora]
Conservation in chicken:
Chicken (galGal3): Region: chr4:46504823-46505136        Identity: >95%
Conservation in other species:
Mouse (mm10):
Region #1:   chr5:97466796-97467109   Identity: 96.82%    E-value: 1e-68   Bit-score: 265.7

Armadillo (dasNov1):
Region #1:   scaffold_12239:17520-17833   Identity: 98.73%    E-value: 3.6e-58   Bit-score: 230.8

Opossum (monDom5):
Region #1:   chr5:60030602-60030912   Identity: 94.86%    E-value: 4.5e-61   Bit-score: 240.7

Platypus (ornAna1):
Region #1:   Ultra512:510747-511060   Identity: 93.65%    E-value: 2.1e-66   Bit-score: 257.6

Zebra_finch (taeGut1):
Region #1:   chr4:734888-735200   Identity: 96.49%    E-value: 2.3e-68   Bit-score: 263.4
This UCNE has 1 paralogous region in Zebra_finch

Lizard (anoCar2):
Region #1:   chr5:145168378-145168687   Identity: 95.48%    E-value: 5.5e-63   Bit-score: 246.1
This UCNE has 1 paralogous region in Lizard

Painted_turtle (chrPic1):
Region #1:   JH585026:304207-304517   Identity: 97.43%    E-value: 4.7e-67   Bit-score: 260.1

Xenopus (xenTro3):
Region #1:   GL172715:1879076-1879385   Identity: 91.72%    E-value: 3.5e-58   Bit-score: 229.9

Fugu (fr2):
Region #1:   chrUn:26806620-26806898   Identity: 82.44%    E-value: 8e-50   Bit-score: 196.7

Medaka (oryLat2):
Region #1:   chr9:32927205-32927432   Identity: 81.82%    E-value: 6.5e-37   Bit-score: 154

Stickleback (gasAcu1):
Tetraodon (tetNig2):
Region #1:   chr12:9791463-9791658   Identity: 72.96%    E-value: 5e-22   Bit-score: 104.4

Zebrafish (danRer7):
Region #1:   chr5:40920904-40921170   Identity: 88.39%    E-value: 2.9e-43   Bit-score: 175.9

Lamprey (petMar1):
Ciona_intestinalis (ci2):
Sea_urchin (strPur2):
Lancelet (braFlo1):