UCNE: PRDM8_Ophelia
(id = 25727)

General information about the entry
Entry location:intergenic
Position:chr4:80416667-80416929
Length:263 nt
Sequence:PRDM8_Ophelia.fasta
Upstream gene:GK2
Downstream gene:GDEP
Paralogs:
Ultraconserved Genomic Regulatory Block (UGRB): PRDM8_cluster: chr4:79908658-80827315
External links:
CONDOR database:
VISTA Enhancer Browser:
UCE (Bejerano et al. 2004):
Other browsers view:[Ensembl] [ECR browser] [Ancora]
Conservation in chicken:
Chicken (galGal3): Region: chr4:46529552-46529833        Identity: >95%
Conservation in other species:
Mouse (mm10):
Region #1:   chr5:97537855-97538113   Identity: 96.53%    E-value: 1.5e-58   Bit-score: 231.7

Armadillo (dasNov1):
Region #1:   scaffold_145026:914-1174   Identity: 95.4%    E-value: 2.7e-55   Bit-score: 221
Region #2:   scaffold_289681:1052-1312   Identity: 95.4%    E-value: 3.5e-55   Bit-score: 220.7

Opossum (monDom5):
Region #1:   chr5:59856375-59856637   Identity: 95.82%    E-value: 3.4e-54   Bit-score: 217.7

Platypus (ornAna1):
Region #1:   Ultra512:480108-480367   Identity: 91.54%    E-value: 2.2e-49   Bit-score: 200.8

Zebra_finch (taeGut1):
Region #1:   chr4:757468-757737   Identity: 92.59%    E-value: 6.1e-54   Bit-score: 215.3

Lizard (anoCar2):
Region #1:   chrUn_GL343425:4407-4671   Identity: 93.21%    E-value: 9.5e-55   Bit-score: 218.5

Painted_turtle (chrPic1):
Region #1:   JH585026:362978-363232   Identity: 92.94%    E-value: 3.2e-51   Bit-score: 207.3

Xenopus (xenTro3):
Region #1:   GL172715:1862661-1862919   Identity: 91.92%    E-value: 1.1e-45   Bit-score: 188.1

Fugu (fr2):
Region #1:   chrUn:26803171-26803378   Identity: 87.32%    E-value: 4.9e-42   Bit-score: 170.6

Medaka (oryLat2):
Stickleback (gasAcu1):
Region #1:   chrUn:56986074-56986271   Identity: 89.22%    E-value: 2.7e-41   Bit-score: 168.3

Tetraodon (tetNig2):
Region #1:   chr12:9789085-9789285   Identity: 89.76%    E-value: 5.5e-44   Bit-score: 177.1

Zebrafish (danRer7):
Region #1:   chr5:40931181-40931376   Identity: 93.37%    E-value: 2.9e-38   Bit-score: 159

Lamprey (petMar1):
Ciona_intestinalis (ci2):
Sea_urchin (strPur2):
Lancelet (braFlo1):