UCNE: NKX6-1_Ava
(id = 25773)

General information about the entry
Entry location:intergenic
Position:chr4:84700502-84701117
Length:616 nt
Sequence:NKX6-1_Ava.fasta
Upstream gene:AGPAT9
Downstream gene:NKX6-1
Paralogs:chr10:134481087-134481502: NKX6-2_Ava;
Ultraconserved Genomic Regulatory Block (UGRB): NKX6-1_cluster: chr4:84597991-85364995
External links:
CONDOR database:CRCNE00004293; CRCNE00011203; CRCNE00004292; CRCNE00004291;
VISTA Enhancer Browser:hs712;
UCE (Bejerano et al. 2004):
Other browsers view:[Ensembl] [ECR browser] [Ancora]
Conservation in chicken:
Chicken (galGal3): Region: chr4:48033025-48033641        Identity: >95%
This UCNE has 1 paralogous region in Chicken

Conservation in other species:
Mouse (mm10):
Region #1:   chr5:101032461-101033076   Identity: 98.05%    E-value: 2.6e-152   Bit-score: 544.4
This UCNE has 1 paralogous region in Mouse

Armadillo (dasNov1):
Region #1:   scaffold_9661:37427-38042   Identity: 99.68%    E-value: 2.6e-150   Bit-score: 537.9
This UCNE has 1 paralogous region in Armadillo

Opossum (monDom5):
Region #1:   chr5:55484721-55485336   Identity: 97.41%    E-value: 7.4e-145   Bit-score: 520

Platypus (ornAna1):
Region #1:   Contig13009:13236-13837   Identity: 91.93%    E-value: 4.2e-133   Bit-score: 480.1
This UCNE has 1 paralogous region in Platypus

Zebra_finch (taeGut1):
Region #1:   chr4:7896392-7897008   Identity: 97.73%    E-value: 6.9e-151   Bit-score: 538.6
This UCNE has 2 paralogous regions in Zebra_finch

Lizard (anoCar2):
Region #1:   chr5:43472912-43473478   Identity: 95.94%    E-value: 2.3e-134   Bit-score: 484.2
This UCNE has 1 paralogous region in Lizard

Painted_turtle (chrPic1):
Region #1:   JH584595:4460980-4461596   Identity: 98.38%    E-value: 5.3e-151   Bit-score: 540
This UCNE has 1 paralogous region in Painted_turtle

Xenopus (xenTro3):
Region #1:   GL173141:626744-627350   Identity: 88.51%    E-value: 2.9e-117   Bit-score: 427.1
This UCNE has 1 paralogous region in Xenopus

Fugu (fr2):
Region #1:   chrUn:75315134-75315689   Identity: 78.25%    E-value: 7e-93   Bit-score: 340.7
This UCNE has 1 paralogous region in Fugu

Medaka (oryLat2):
Region #1:   chr12:24653171-24653311   Identity: 82.98%    E-value: 1.2e-20   Bit-score: 100.9

Stickleback (gasAcu1):
This UCNE has 1 paralogous region in Stickleback

Tetraodon (tetNig2):
Region #1:   chr4:3004600-3005166   Identity: 77.41%    E-value: 8.8e-92   Bit-score: 337.1
This UCNE has 1 paralogous region in Tetraodon

Zebrafish (danRer7):
Region #1:   chr21:18086612-18086940   Identity: 78.1%    E-value: 2.9e-44   Bit-score: 180.2
Region #2:   chr21:18086960-18087163   Identity: 82.84%    E-value: 2.2e-30   Bit-score: 134.1

Lamprey (petMar1):
Ciona_intestinalis (ci2):
Sea_urchin (strPur2):
Lancelet (braFlo1):