General information about the entry |
Entry location: | intergenic |
Position: | chr4:84991443-84991704  |
Length: | 262 nt |
Sequence: | NKX6-1_Hector.fasta |
Upstream gene: | AGPAT9 |
Downstream gene: | NKX6-1 |
Paralogs: | |
Ultraconserved Genomic Regulatory Block (UGRB): |
NKX6-1_cluster: chr4:84597991-85364995  |
External links: |
CONDOR database: | CRCNE00004279; |
VISTA Enhancer Browser: | |
UCE (Bejerano et al. 2004): | |
Other browsers view: | [Ensembl]
[ECR browser]
[Ancora]
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Conservation in chicken: |
Chicken (galGal3): | Region: chr4:48128338-48128599        Identity: >95%This UCNE has 1 paralogous region in Chicken
Paralog #1:   chr6:37200129-37200231   Identity: 72.12%
   E-value: 0.0000082   Bit-score: 55.2 |
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Conservation in other species: |
Mouse (mm10): | Region #1:   chr5:101323189-101323448   Identity: 97.69%
   E-value: 5.5e-69   Bit-score: 266.4 |
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Armadillo (dasNov1): | Region #1:   scaffold_70750:1535-1682   Identity: 95.95%
   E-value: 1e-30   Bit-score: 139.4 |
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Opossum (monDom5): | Region #1:   chr5:56026007-56026266   Identity: 91.15%
   E-value: 3.8e-58   Bit-score: 230.8 |
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Platypus (ornAna1): | Region #1:   Contig578:256126-256225   Identity: 72%
   E-value: 0.000018   Bit-score: 54.9 |
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Zebra_finch (taeGut1): | Region #1:   chr4:7788381-7788642   Identity: 94.66%
   E-value: 5.8e-65   Bit-score: 251.9 |
This UCNE has 1 paralogous region in Zebra_finch
Paralog #1:   chr6:36079660-36079774   Identity: 69.83%
   E-value: 0.000019   Bit-score: 54.2 |
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Lizard (anoCar2): | Region #1:   chr5:43592981-43593242   Identity: 89.31%
   E-value: 7e-57   Bit-score: 225.5 |
This UCNE has 1 paralogous region in Lizard
Paralog #1:   chr3:59049425-59049526   Identity: 72.55%
   E-value: 0.0000016   Bit-score: 58.3 |
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Painted_turtle (chrPic1): | Region #1:   JH584595:4286340-4286601   Identity: 95.04%
   E-value: 1.4e-63   Bit-score: 248.4 |
This UCNE has 1 paralogous region in Painted_turtle
Paralog #1:   JH584785:2430106-2430212   Identity: 72.9%
   E-value: 0.00000049   Bit-score: 60.5 |
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Xenopus (xenTro3): | Region #1:   GL172959:302386-302642   Identity: 85.11%
   E-value: 1.5e-45   Bit-score: 187.6 |
This UCNE has 1 paralogous region in Xenopus
Paralog #1:   GL172952:314616-314712   Identity: 74.23%
   E-value: 0.0000034   Bit-score: 56.9 |
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Fugu (fr2): |
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Medaka (oryLat2): |
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Stickleback (gasAcu1): |
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Tetraodon (tetNig2): |
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Zebrafish (danRer7): | Region #1:   chr21:18005213-18005297   Identity: 75.58%
   E-value: 0.000031   Bit-score: 49.3 |
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Lamprey (petMar1): |
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Ciona_intestinalis (ci2): |
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Sea_urchin (strPur2): |
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Lancelet (braFlo1): |
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