UCNE: NKX6-1_Traviata
(id = 25809)

General information about the entry
Entry location:intergenic
Position:chr4:85355520-85355821
Length:302 nt
Sequence:NKX6-1_Traviata.fasta
Upstream gene:AGPAT9
Downstream gene:NKX6-1
Paralogs:
Ultraconserved Genomic Regulatory Block (UGRB): NKX6-1_cluster: chr4:84597991-85364995
External links:
CONDOR database:CRCNE00004266;
VISTA Enhancer Browser:
UCE (Bejerano et al. 2004):
Other browsers view:[Ensembl] [ECR browser] [Ancora]
Conservation in chicken:
Chicken (galGal3): Region: chr4:48247099-48247400        Identity: >95%
Conservation in other species:
Mouse (mm10):
Region #1:   chr5:101591368-101591661   Identity: 95.93%    E-value: 6.4e-69   Bit-score: 266.3

Armadillo (dasNov1):
Region #1:   scaffold_4435:54740-55039   Identity: 96.68%    E-value: 1.5e-67   Bit-score: 262

Opossum (monDom5):
Region #1:   chr5:56530267-56530568   Identity: 96.36%    E-value: 2e-70   Bit-score: 271.8

Platypus (ornAna1):
Region #1:   Contig3908:26138-26441   Identity: 91.45%    E-value: 5.2e-63   Bit-score: 246.2

Zebra_finch (taeGut1):
Region #1:   chr4:7668389-7668690   Identity: 96.36%    E-value: 3e-71   Bit-score: 273

Lizard (anoCar2):
Region #1:   chr5:43740117-43740418   Identity: 96.03%    E-value: 1.6e-72   Bit-score: 277.7
This UCNE has 1 paralogous region in Lizard

Painted_turtle (chrPic1):
Region #1:   JH584595:4102699-4103000   Identity: 97.02%    E-value: 6.6e-74   Bit-score: 282.8

Xenopus (xenTro3):
Region #1:   GL172959:580707-581008   Identity: 91.06%    E-value: 9.7e-62   Bit-score: 241.6

Fugu (fr2):
Medaka (oryLat2):
Stickleback (gasAcu1):
Tetraodon (tetNig2):
Zebrafish (danRer7):
Region #1:   chr21:17921630-17921877   Identity: 69.32%    E-value: 8.6e-23   Bit-score: 107.8

Lamprey (petMar1):
Ciona_intestinalis (ci2):
Sea_urchin (strPur2):
Lancelet (braFlo1):