General information about the entry |
Entry location: | UTR |
Position: | chr4:160280998-160281299  |
Length: | 302 nt |
Sequence: | chr4_Whitney.fasta |
Overlapping gene: | RAPGEF2 |
Paralogs: | chr5:130759670-130759787
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External links: |
CONDOR database: | |
VISTA Enhancer Browser: | |
UCE (Bejerano et al. 2004): | |
Other browsers view: | [Ensembl]
[ECR browser]
[Ancora]
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Conservation in chicken: |
Chicken (galGal3): | Region: chr4:23312261-23312563        Identity: >95%This UCNE has 1 paralogous region in Chicken
Paralog #1:   chr13:16931334-16931544   Identity: 67.53%
   E-value: 0.000016   Bit-score: 54.4 |
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Conservation in other species: |
Mouse (mm10): | Region #1:   chr3:79062532-79062833   Identity: 98.34%
   E-value: 6.8e-49   Bit-score: 199.8 |
This UCNE has 7 paralogous regions in Mouse
Paralog #1:   chr3:94085445-94085745   Identity: 95.36%
   E-value: 3.1e-45   Bit-score: 187.7 |
Paralog #2:   chr3:93974673-93974973   Identity: 95.03%
   E-value: 7.1e-45   Bit-score: 186.5 |
Paralog #3:   chr3:93721090-93721390   Identity: 95.03%
   E-value: 7.1e-45   Bit-score: 186.5 |
Paralog #4:   chr3:93916481-93916781   Identity: 94.37%
   E-value: 3.6e-44   Bit-score: 184.1 |
Paralog #5:   chr11:26970905-26971115   Identity: 92.42%
   E-value: 1.3e-26   Bit-score: 125.8 |
Paralog #6:   chr11:51092863-51093113   Identity: 81.5%
   E-value: 3.3e-22   Bit-score: 111.2 |
Paralog #7:   chr3:94171888-94171994   Identity: 89.81%
   E-value: 0.00000004   Bit-score: 64.4 |
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Armadillo (dasNov1): | Region #1:   scaffold_3885:56410-56710   Identity: 98.68%
   E-value: 2.6e-44   Bit-score: 184.8 |
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Opossum (monDom5): | Region #1:   chr5:115657765-115658071   Identity: 95.44%
   E-value: 2.6e-38   Bit-score: 165.1 |
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Platypus (ornAna1): | Region #1:   chr12:13021510-13021812   Identity: 97.36%
   E-value: 3.6e-53   Bit-score: 213.5 |
This UCNE has 2 paralogous regions in Platypus
Paralog #1:   Contig172684:471-730   Identity: 63.88%
   E-value: 0.00000096   Bit-score: 59.3 |
Paralog #2:   Contig30932:308-567   Identity: 63.88%
   E-value: 0.00000099   Bit-score: 59.3 |
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Zebra_finch (taeGut1): | Region #1:   chr4:30052598-30052899   Identity: 98.02%
   E-value: 1.4e-49   Bit-score: 201 |
This UCNE has 1 paralogous region in Zebra_finch
Paralog #1:   chr13:10864921-10865131   Identity: 67.53%
   E-value: 0.000013   Bit-score: 55 |
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Lizard (anoCar2): | Region #1:   chr5:128003859-128004162   Identity: 94.46%
   E-value: 3.8e-49   Bit-score: 200.1 |
This UCNE has 1 paralogous region in Lizard
Paralog #1:   chr2:128946530-128946749   Identity: 66.39%
   E-value: 0.0000085   Bit-score: 56.1 |
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Painted_turtle (chrPic1): | Region #1:   JH584697:3067410-3067712   Identity: 96.37%
   E-value: 2.3e-48   Bit-score: 198 |
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Xenopus (xenTro3): | Region #1:   GL172746:1044177-1044466   Identity: 93.94%
   E-value: 7.2e-43   Bit-score: 178.9 |
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Fugu (fr2): | Region #1:   chrUn:140235175-140235472   Identity: 76.68%
   E-value: 1.7e-34   Bit-score: 145.8 |
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Medaka (oryLat2): | Region #2:   chr14:3575984-3576110   Identity: 70.54%
   E-value: 0.000055   Bit-score: 47.9 |
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Stickleback (gasAcu1): | Region #1:   chrIV:2515420-2515722   Identity: 73.9%
   E-value: 3.8e-28   Bit-score: 124.8 |
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Tetraodon (tetNig2): | Region #1:   chr20:2325196-2325501   Identity: 74.14%
   E-value: 2.8e-30   Bit-score: 131.8 |
This UCNE has 1 paralogous region in Tetraodon
Paralog #1:   chr7:8976759-8976889   Identity: 68.18%
   E-value: 0.000013   Bit-score: 49.8 |
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Zebrafish (danRer7): | Region #1:   chr14:50716481-50716823   Identity: 70.11%
   E-value: 2.7e-17   Bit-score: 89.6 |
Region #2:   chr1:19921086-19921252   Identity: 71.43%
   E-value: 0.0000032   Bit-score: 52.8 |
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Lamprey (petMar1): |
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Ciona_intestinalis (ci2): |
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Sea_urchin (strPur2): |
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Lancelet (braFlo1): |
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