UCNE: IRXA_Vivien_1
(id = 26757)

General information about the entry
Entry location:intergenic
Position:chr5:2112526-2112743
Length:218 nt
Sequence:IRXA_Vivien_1.fasta
Upstream gene:IRX4
Downstream gene:IRX2
Paralogs:chr16:55223750-55223959: IRXB_Vivien;
Ultraconserved Genomic Regulatory Block (UGRB): IRXA_cluster: chr5:2112526-4805550
External links:
CONDOR database:CRCNE00006737; CRCNE00006736; CRCNE00006735;
VISTA Enhancer Browser:hs633;
UCE (Bejerano et al. 2004):
Other browsers view:[Ensembl] [ECR browser] [Ancora]
Conservation in chicken:
Chicken (galGal3): Region: chr2:88502274-88502491        Identity: >95%
This UCNE has 2 paralogous regions in Chicken

Conservation in other species:
Mouse (mm10):
Region #1:   chr13:73117311-73117527   Identity: 95.87%    E-value: 5.9e-53   Bit-score: 212.8
This UCNE has 1 paralogous region in Mouse

Armadillo (dasNov1):
Region #1:   scaffold_24989:3369-3585   Identity: 94.5%    E-value: 2.2e-48   Bit-score: 197.8
This UCNE has 1 paralogous region in Armadillo

Opossum (monDom5):
Region #1:   chr3:93668365-93668581   Identity: 97.71%    E-value: 3.4e-54   Bit-score: 217.4
This UCNE has 1 paralogous region in Opossum

Platypus (ornAna1):
Region #1:   chrX3:4830050-4830268   Identity: 95.45%    E-value: 1.6e-52   Bit-score: 210.9
This UCNE has 1 paralogous region in Platypus

Zebra_finch (taeGut1):
Region #1:   chr2:91358687-91358902   Identity: 97.24%    E-value: 3.2e-53   Bit-score: 212.6
This UCNE has 2 paralogous regions in Zebra_finch

Lizard (anoCar2):
Region #1:   chr4:68774926-68775143   Identity: 94.06%    E-value: 2.1e-49   Bit-score: 200.4
This UCNE has 2 paralogous regions in Lizard

Painted_turtle (chrPic1):
Region #1:   JH584562:1721270-1721485   Identity: 97.24%    E-value: 1e-49   Bit-score: 202
This UCNE has 1 paralogous region in Painted_turtle

Xenopus (xenTro3):
Region #1:   GL173480:202034-202250   Identity: 95.41%    E-value: 6.4e-45   Bit-score: 185.3
This UCNE has 2 paralogous regions in Xenopus

Fugu (fr2):
Region #1:   chrUn:64083827-64084011   Identity: 77.54%    E-value: 9.3e-24   Bit-score: 109.6

Medaka (oryLat2):
Region #1:   chr16:8470579-8470788   Identity: 77.73%    E-value: 4.1e-28   Bit-score: 124.2

Stickleback (gasAcu1):
Region #1:   chrXX:6939229-6939470   Identity: 68.31%    E-value: 2.9e-21   Bit-score: 101.5

Tetraodon (tetNig2):
Zebrafish (danRer7):
Region #1:   chr16:429951-430195   Identity: 74.8%    E-value: 8.3e-27   Bit-score: 120.7

Lamprey (petMar1):
Ciona_intestinalis (ci2):
Sea_urchin (strPur2):
Lancelet (braFlo1):