UCNE: IRXA_Vivien_2
(id = 26758)

General information about the entry
Entry location:intergenic
Position:chr5:2112745-2113237
Length:493 nt
Sequence:IRXA_Vivien_2.fasta
Upstream gene:IRX4
Downstream gene:IRX2
Paralogs:chr16:54323668-54324032: IRXB_Ruby;
chr16:55223354-55223745: IRXB_Vivien;
chr5:3512720-3513032: IRXA_Ruby;
Ultraconserved Genomic Regulatory Block (UGRB): IRXA_cluster: chr5:2112526-4805550
External links:
CONDOR database:CRCNE00006735; CRCNE00006734;
VISTA Enhancer Browser:hs633;
UCE (Bejerano et al. 2004):
Other browsers view:[Ensembl] [ECR browser] [Ancora]
Conservation in chicken:
Chicken (galGal3): Region: chr2:88502493-88502986        Identity: >95%
This UCNE has 3 paralogous regions in Chicken

Conservation in other species:
Mouse (mm10):
Region #1:   chr13:73116817-73117309   Identity: 96.96%    E-value: 3.5e-107   Bit-score: 394.2
This UCNE has 3 paralogous regions in Mouse

Armadillo (dasNov1):
Region #1:   scaffold_24989:3587-4064   Identity: 92.71%    E-value: 1.3e-88   Bit-score: 332.6
This UCNE has 3 paralogous regions in Armadillo

Opossum (monDom5):
Region #1:   chr3:93668583-93669076   Identity: 97.98%    E-value: 1.3e-103   Bit-score: 382.7
This UCNE has 3 paralogous regions in Opossum

Platypus (ornAna1):
Region #1:   chrX3:4829555-4830048   Identity: 97.17%    E-value: 2.7e-112   Bit-score: 410.7
This UCNE has 3 paralogous regions in Platypus

Zebra_finch (taeGut1):
Region #1:   chr2:91358905-91359398   Identity: 97.17%    E-value: 6.6e-105   Bit-score: 385.5
This UCNE has 3 paralogous regions in Zebra_finch

Lizard (anoCar2):
Region #1:   chr4:68775146-68775639   Identity: 96.15%    E-value: 6.7e-109   Bit-score: 399.3
This UCNE has 3 paralogous regions in Lizard

Painted_turtle (chrPic1):
Region #1:   JH584562:1721488-1721981   Identity: 95.55%    E-value: 4.8e-102   Bit-score: 377

Xenopus (xenTro3):
Region #1:   GL173480:202252-202744   Identity: 95.95%    E-value: 6.7e-101   Bit-score: 372.4
This UCNE has 3 paralogous regions in Xenopus

Fugu (fr2):
Region #1:   chrUn:64083155-64083681   Identity: 80.34%    E-value: 5.4e-92   Bit-score: 337.5
This UCNE has 4 paralogous regions in Fugu

Medaka (oryLat2):
Region #1:   chr16:8470899-8471397   Identity: 83.03%    E-value: 3.1e-87   Bit-score: 321.8
This UCNE has 4 paralogous regions in Medaka

Stickleback (gasAcu1):
Region #1:   chrXX:6938625-6939147   Identity: 81.63%    E-value: 1.4e-89   Bit-score: 329.6
This UCNE has 3 paralogous regions in Stickleback

Tetraodon (tetNig2):
This UCNE has 2 paralogous regions in Tetraodon

Zebrafish (danRer7):
Region #1:   chr16:429462-429949   Identity: 85.03%    E-value: 4.1e-82   Bit-score: 305.6
This UCNE has 6 paralogous regions in Zebrafish

Lamprey (petMar1):
Ciona_intestinalis (ci2):
Sea_urchin (strPur2):
Lancelet (braFlo1):