UCNE: IRXA_Siddhartha_2
(id = 26831)

General information about the entry
Entry location:intergenic
Position:chr5:3186966-3187729
Length:764 nt
Sequence:IRXA_Siddhartha_2.fasta
Upstream gene:C5orf38
Downstream gene:IRX1
Paralogs:chr16:54576694-54577277: IRXB_Siddhartha_2; IRXB_Siddhartha_3;
Ultraconserved Genomic Regulatory Block (UGRB): IRXA_cluster: chr5:2112526-4805550
External links:
CONDOR database:CRCNE00006676; CRCNE00006675;
VISTA Enhancer Browser:hs533;
UCE (Bejerano et al. 2004):
Other browsers view:[Ensembl] [ECR browser] [Ancora]
Conservation in chicken:
Chicken (galGal3): Region: chr2:89189411-89190175        Identity: >95%
This UCNE has 1 paralogous region in Chicken

Conservation in other species:
Mouse (mm10):
Region #1:   chr13:72298040-72298808   Identity: 95.71%    E-value: 6.5e-153   Bit-score: 546.7
This UCNE has 1 paralogous region in Mouse

Armadillo (dasNov1):
Region #1:   scaffold_118282:5863-6626   Identity: 96.47%    E-value: 1.8e-136   Bit-score: 492.2
This UCNE has 1 paralogous region in Armadillo

Opossum (monDom5):
Region #1:   chr3:95538729-95539490   Identity: 96.98%    E-value: 2e-138   Bit-score: 499
This UCNE has 1 paralogous region in Opossum

Platypus (ornAna1):
Region #1:   chrX3:4021582-4022343   Identity: 96.85%    E-value: 3.8e-164   Bit-score: 583.5
This UCNE has 1 paralogous region in Platypus

Zebra_finch (taeGut1):
Region #1:   chr2:92028213-92028974   Identity: 97.11%    E-value: 4e-154   Bit-score: 549.6
This UCNE has 1 paralogous region in Zebra_finch

Lizard (anoCar2):
Region #1:   chrUn_GL343292:1134255-1135026   Identity: 94.95%    E-value: 2.2e-159   Bit-score: 567.6
This UCNE has 1 paralogous region in Lizard

Painted_turtle (chrPic1):
Region #1:   JH584427:313250-314011   Identity: 96.98%    E-value: 1.7e-149   Bit-score: 535.3
This UCNE has 1 paralogous region in Painted_turtle

Xenopus (xenTro3):
Region #1:   GL172767:831886-832649   Identity: 93.46%    E-value: 1.9e-139   Bit-score: 501.1
This UCNE has 1 paralogous region in Xenopus

Fugu (fr2):
Region #1:   chrUn:63970293-63971135   Identity: 74.59%    E-value: 2.6e-115   Bit-score: 415.6
This UCNE has 2 paralogous regions in Fugu

Medaka (oryLat2):
Region #1:   chr16:8737366-8738077   Identity: 78.21%    E-value: 6.3e-101   Bit-score: 367.9
This UCNE has 1 paralogous region in Medaka

Stickleback (gasAcu1):
Region #1:   chrXX:6808169-6808909   Identity: 80.38%    E-value: 1.7e-116   Bit-score: 419.7
This UCNE has 1 paralogous region in Stickleback

Tetraodon (tetNig2):
Region #1:   chr8:4521292-4521849   Identity: 80.11%    E-value: 1.1e-88   Bit-score: 327.1
This UCNE has 2 paralogous regions in Tetraodon

Zebrafish (danRer7):
Region #1:   chr16:764725-765394   Identity: 78.96%    E-value: 1.2e-82   Bit-score: 308
This UCNE has 1 paralogous region in Zebrafish

Lamprey (petMar1):
Ciona_intestinalis (ci2):
Sea_urchin (strPur2):
Lancelet (braFlo1):