UCNE: IRXA_Scott
(id = 26832)

General information about the entry
Entry location:intergenic
Position:chr5:3198062-3198767
Length:706 nt
Sequence:IRXA_Scott.fasta
Upstream gene:C5orf38
Downstream gene:IRX1
Paralogs:chr16:54540558-54540840
Ultraconserved Genomic Regulatory Block (UGRB): IRXA_cluster: chr5:2112526-4805550
External links:
CONDOR database:CRCNE00006673; CRCNE00006672; CRCNE00006796;
VISTA Enhancer Browser:hs754;
UCE (Bejerano et al. 2004):
Other browsers view:[Ensembl] [ECR browser] [Ancora]
Conservation in chicken:
Chicken (galGal3): Region: chr2:89198991-89199696        Identity: >95%
Conservation in other species:
Mouse (mm10):
Region #1:   chr13:72288594-72289295   Identity: 92.61%    E-value: 1.5e-99   Bit-score: 369.3

Armadillo (dasNov1):
Region #1:   scaffold_20650:17313-18015   Identity: 91.78%    E-value: 2.9e-92   Bit-score: 345.3

Opossum (monDom5):
Region #1:   chr3:95553735-95554440   Identity: 96.6%    E-value: 9.2e-92   Bit-score: 343.9

Platypus (ornAna1):
Region #1:   chrX3:3999201-3999906   Identity: 94.48%    E-value: 1.1e-127   Bit-score: 462.3
This UCNE has 1 paralogous region in Platypus

Zebra_finch (taeGut1):
Region #1:   chr2:92036336-92037041   Identity: 96.88%    E-value: 1.7e-117   Bit-score: 427.8

Lizard (anoCar2):
Region #1:   chrUn_GL343292:1120438-1121149   Identity: 92.98%    E-value: 4.9e-117   Bit-score: 426.8

Painted_turtle (chrPic1):
Region #1:   JH584427:298626-299331   Identity: 96.03%    E-value: 1.2e-120   Bit-score: 439.4

Xenopus (xenTro3):
Region #1:   GL172767:854790-855496   Identity: 91.23%    E-value: 1.2e-102   Bit-score: 378.7

Fugu (fr2):
Region #1:   chrUn:63964264-63964919   Identity: 73.93%    E-value: 4.5e-86   Bit-score: 318.3
This UCNE has 1 paralogous region in Fugu

Medaka (oryLat2):
Region #1:   chr16:8742814-8743409   Identity: 77.09%    E-value: 5.5e-75   Bit-score: 281.6
This UCNE has 1 paralogous region in Medaka

Stickleback (gasAcu1):
Region #1:   chrXX:6803181-6803818   Identity: 75.62%    E-value: 1.5e-84   Bit-score: 313.5
This UCNE has 1 paralogous region in Stickleback

Tetraodon (tetNig2):
Region #1:   chr8:4515221-4515840   Identity: 75%    E-value: 1.5e-84   Bit-score: 313.2
This UCNE has 1 paralogous region in Tetraodon

Zebrafish (danRer7):
Region #1:   chr16:776850-777372   Identity: 71.78%    E-value: 3.2e-37   Bit-score: 157

Lamprey (petMar1):
Ciona_intestinalis (ci2):
Sea_urchin (strPur2):
Lancelet (braFlo1):