UCNE: IRXA_Scout
(id = 26835)

General information about the entry
Entry location:intergenic
Position:chr5:3226527-3227123
Length:597 nt
Sequence:IRXA_Scout.fasta
Upstream gene:C5orf38
Downstream gene:IRX1
Paralogs:
Ultraconserved Genomic Regulatory Block (UGRB): IRXA_cluster: chr5:2112526-4805550
External links:
CONDOR database:CRCNE00006669; CRCNE00006668;
VISTA Enhancer Browser:hs180;
UCE (Bejerano et al. 2004):
Other browsers view:[Ensembl] [ECR browser] [Ancora]
Conservation in chicken:
Chicken (galGal3): Region: chr2:89220189-89220785        Identity: >95%
This UCNE has 1 paralogous region in Chicken

Conservation in other species:
Mouse (mm10):
Region #1:   chr13:72265311-72265907   Identity: 96.82%    E-value: 3.3e-103   Bit-score: 381.2

Armadillo (dasNov1):
Opossum (monDom5):
Region #1:   chr3:95602152-95602760   Identity: 66.99%    E-value: 2e-50   Bit-score: 206.3

Platypus (ornAna1):
Region #1:   chrX3:3974983-3975579   Identity: 97.32%    E-value: 7.5e-115   Bit-score: 419.4

Zebra_finch (taeGut1):
Region #1:   chr2:92056795-92057391   Identity: 97.32%    E-value: 6e-104   Bit-score: 382.6
This UCNE has 1 paralogous region in Zebra_finch

Lizard (anoCar2):
Region #1:   chrUn_GL343292:1100092-1100702   Identity: 94.11%    E-value: 1.3e-106   Bit-score: 391.9

Painted_turtle (chrPic1):
Region #1:   JH584427:262355-262950   Identity: 97.49%    E-value: 1.9e-104   Bit-score: 385.3
This UCNE has 1 paralogous region in Painted_turtle

Xenopus (xenTro3):
Region #1:   GL172767:864073-864669   Identity: 94.97%    E-value: 4e-100   Bit-score: 370.1

Fugu (fr2):
Region #1:   chrUn:63961463-63962110   Identity: 78.07%    E-value: 1.9e-89   Bit-score: 329.3

Medaka (oryLat2):
Region #1:   chr16:8746286-8746917   Identity: 79.19%    E-value: 2.2e-78   Bit-score: 292.6

Stickleback (gasAcu1):
Region #1:   chrXX:6799758-6800393   Identity: 79.35%    E-value: 1.9e-84   Bit-score: 312.9

Tetraodon (tetNig2):
Region #1:   chr8:4512539-4513180   Identity: 78.67%    E-value: 2.1e-89   Bit-score: 329.1

Zebrafish (danRer7):
Region #1:   chr16:788775-789400   Identity: 74.53%    E-value: 1.3e-51   Bit-score: 204.6

Lamprey (petMar1):
Ciona_intestinalis (ci2):
Sea_urchin (strPur2):
Lancelet (braFlo1):