UCNE: IRXA_Scarlett
(id = 26841)

General information about the entry
Entry location:intergenic
Position:chr5:3357367-3357567
Length:201 nt
Sequence:IRXA_Scarlett.fasta
Upstream gene:C5orf38
Downstream gene:IRX1
Paralogs:
Ultraconserved Genomic Regulatory Block (UGRB): IRXA_cluster: chr5:2112526-4805550
External links:
CONDOR database:CRCNE00006662;
VISTA Enhancer Browser:
UCE (Bejerano et al. 2004):
Other browsers view:[Ensembl] [ECR browser] [Ancora]
Conservation in chicken:
Chicken (galGal3): Region: chr2:89299522-89299722        Identity: >95%
Conservation in other species:
Mouse (mm10):
Region #1:   chr13:72154458-72154659   Identity: 96.04%    E-value: 7.5e-47   Bit-score: 192.4

Armadillo (dasNov1):
Opossum (monDom5):
Region #1:   chr3:95853563-95853760   Identity: 95.52%    E-value: 3.6e-44   Bit-score: 184

Platypus (ornAna1):
Region #1:   chrX3:3873286-3873485   Identity: 97%    E-value: 1e-48   Bit-score: 198.2

Zebra_finch (taeGut1):
Region #1:   chr2:92149856-92150055   Identity: 96%    E-value: 1.1e-47   Bit-score: 194

Lizard (anoCar2):
Region #1:   chrUn_GL343292:989570-989769   Identity: 94.5%    E-value: 1.4e-47   Bit-score: 194.2

Painted_turtle (chrPic1):
Region #1:   JH584427:109574-109773   Identity: 96.5%    E-value: 3.5e-47   Bit-score: 193.5

Xenopus (xenTro3):
Region #1:   GL172767:945317-945515   Identity: 91.96%    E-value: 3e-38   Bit-score: 163

Fugu (fr2):
Region #1:   chrUn:63944760-63944927   Identity: 78.57%    E-value: 1.2e-23   Bit-score: 109.1

Medaka (oryLat2):
Region #1:   chr16:8779867-8780034   Identity: 78.57%    E-value: 5.7e-22   Bit-score: 103.7

Stickleback (gasAcu1):
Region #1:   chrXX:6778968-6779136   Identity: 78.7%    E-value: 2.2e-22   Bit-score: 105.1

Tetraodon (tetNig2):
Region #1:   chr8:4495520-4495685   Identity: 79.52%    E-value: 6.6e-24   Bit-score: 110

Zebrafish (danRer7):
Region #1:   chr16:690386-690575   Identity: 81.05%    E-value: 3.6e-27   Bit-score: 121.8

Lamprey (petMar1):
Ciona_intestinalis (ci2):
Sea_urchin (strPur2):
Lancelet (braFlo1):