UCNE: IRXA_Santiago_1
(id = 26847)

General information about the entry
Entry location:intergenic
Position:chr5:3428119-3428324
Length:206 nt
Sequence:IRXA_Santiago_1.fasta
Upstream gene:C5orf38
Downstream gene:IRX1
Paralogs:
Ultraconserved Genomic Regulatory Block (UGRB): IRXA_cluster: chr5:2112526-4805550
External links:
CONDOR database:CRCNE00006656;
VISTA Enhancer Browser:
UCE (Bejerano et al. 2004):
Other browsers view:[Ensembl] [ECR browser] [Ancora]
Conservation in chicken:
Chicken (galGal3): Region: chr2:89334491-89334698        Identity: >95%
Conservation in other species:
Mouse (mm10):
Region #1:   chr13:72097721-72097927   Identity: 95.17%    E-value: 5.4e-41   Bit-score: 173

Armadillo (dasNov1):
Region #1:   scaffold_17285:31360-31565   Identity: 94.17%    E-value: 3.7e-37   Bit-score: 160.4

Opossum (monDom5):
Region #1:   chr3:95995545-95995744   Identity: 96%    E-value: 1e-36   Bit-score: 159.2

Platypus (ornAna1):
Region #1:   chrX3:3807574-3807780   Identity: 95.17%    E-value: 2.4e-42   Bit-score: 177
This UCNE has 1 paralogous region in Platypus

Zebra_finch (taeGut1):
Region #1:   chr2:92183901-92184107   Identity: 95.17%    E-value: 8.9e-42   Bit-score: 174.5

Lizard (anoCar2):
Region #1:   chrUn_GL343292:917273-917481   Identity: 87.56%    E-value: 1.7e-35   Bit-score: 154.1

Painted_turtle (chrPic1):
Region #1:   JH584427:65469-65669   Identity: 95.52%    E-value: 3.8e-39   Bit-score: 166.8

Xenopus (xenTro3):
Region #1:   GL172767:968685-968889   Identity: 91.75%    E-value: 1.3e-35   Bit-score: 154.3

Fugu (fr2):
Region #1:   chrUn:63937859-63938064   Identity: 77.29%    E-value: 8.7e-29   Bit-score: 126.2
This UCNE has 1 paralogous region in Fugu

Medaka (oryLat2):
Region #1:   chr16:8791398-8791596   Identity: 74.26%    E-value: 4.9e-21   Bit-score: 100.6
This UCNE has 1 paralogous region in Medaka

Stickleback (gasAcu1):
Region #1:   chrXX:6771451-6771651   Identity: 77.11%    E-value: 1.6e-27   Bit-score: 122.2
This UCNE has 1 paralogous region in Stickleback

Tetraodon (tetNig2):
Region #1:   chr8:4489588-4489782   Identity: 75%    E-value: 7.3e-25   Bit-score: 113.2
This UCNE has 1 paralogous region in Tetraodon

Zebrafish (danRer7):
Region #1:   chr16:712016-712202   Identity: 73.8%    E-value: 1.7e-17   Bit-score: 89.7
This UCNE has 1 paralogous region in Zebrafish

Lamprey (petMar1):
Ciona_intestinalis (ci2):
Sea_urchin (strPur2):
Lancelet (braFlo1):