UCNE: IRXA_Ryan
(id = 26849)

General information about the entry
Entry location:intergenic
Position:chr5:3489661-3489954
Length:294 nt
Sequence:IRXA_Ryan.fasta
Upstream gene:C5orf38
Downstream gene:IRX1
Paralogs:
Ultraconserved Genomic Regulatory Block (UGRB): IRXA_cluster: chr5:2112526-4805550
External links:
CONDOR database:CRCNE00006654;
VISTA Enhancer Browser:
UCE (Bejerano et al. 2004):
Other browsers view:[Ensembl] [ECR browser] [Ancora]
Conservation in chicken:
Chicken (galGal3): Region: chr2:89368399-89368692        Identity: >95%
Conservation in other species:
Mouse (mm10):
Region #1:   chr13:72063135-72063432   Identity: 83.95%    E-value: 9.1e-51   Bit-score: 206

Armadillo (dasNov1):
Region #1:   scaffold_35990:12251-12544   Identity: 95.58%    E-value: 1e-69   Bit-score: 269.1
Region #2:   scaffold_180755:3021-3228   Identity: 96.17%    E-value: 4e-47   Bit-score: 194

Opossum (monDom5):
Region #1:   chr3:96069925-96070218   Identity: 95.92%    E-value: 1.6e-73   Bit-score: 282

Platypus (ornAna1):
Region #1:   chrX3:3771943-3772238   Identity: 95.61%    E-value: 5.9e-71   Bit-score: 272.6

Zebra_finch (taeGut1):
Region #1:   chr2:92221096-92221389   Identity: 96.6%    E-value: 2.6e-70   Bit-score: 269.8

Lizard (anoCar2):
Region #1:   chrUn_GL343292:882357-882651   Identity: 93.56%    E-value: 1e-68   Bit-score: 265.1

Painted_turtle (chrPic1):
Region #1:   JH584427:27515-27808   Identity: 96.6%    E-value: 4.4e-73   Bit-score: 280.1

Xenopus (xenTro3):
Region #1:   GL176591:5829-6109   Identity: 92.17%    E-value: 1.6e-60   Bit-score: 237.5
This UCNE has 1 paralogous region in Xenopus

Fugu (fr2):
Region #1:   chrUn:63936429-63936588   Identity: 73.75%    E-value: 1.4e-17   Bit-score: 89.6

Medaka (oryLat2):
Region #1:   chr16:8798319-8798688   Identity: 60.32%    E-value: 1.2e-18   Bit-score: 93.1

Stickleback (gasAcu1):
Region #1:   chrXX:6768946-6769297   Identity: 58.54%    E-value: 3.5e-16   Bit-score: 85.1

Tetraodon (tetNig2):
Region #1:   chr8:4488571-4488730   Identity: 73.46%    E-value: 3.3e-17   Bit-score: 88.3

Zebrafish (danRer7):
Region #1:   chr16:715531-715820   Identity: 74.92%    E-value: 2.2e-35   Bit-score: 149.7

Lamprey (petMar1):
Ciona_intestinalis (ci2):
Sea_urchin (strPur2):
Lancelet (braFlo1):