UCNE: IRXA_Mignon
(id = 26855)

General information about the entry
Entry location:intergenic
Position:chr5:3513631-3513894
Length:264 nt
Sequence:IRXA_Mignon.fasta
Upstream gene:C5orf38
Downstream gene:IRX1
Paralogs:
Ultraconserved Genomic Regulatory Block (UGRB): IRXA_cluster: chr5:2112526-4805550
External links:
CONDOR database:CRCNE00006647; CRCNE00006646;
VISTA Enhancer Browser:
UCE (Bejerano et al. 2004):
Other browsers view:[Ensembl] [ECR browser] [Ancora]
Conservation in chicken:
Chicken (galGal3): Region: chr2:89380193-89380458        Identity: >95%
This UCNE has 2 paralogous regions in Chicken

Conservation in other species:
Mouse (mm10):
Region #1:   chr13:72027963-72028224   Identity: 92.42%    E-value: 3e-61   Bit-score: 240.7

Armadillo (dasNov1):
Region #1:   scaffold_74248:6448-6707   Identity: 90.04%    E-value: 2.4e-54   Bit-score: 217.9

Opossum (monDom5):
Region #1:   chr3:96104470-96104735   Identity: 96.24%    E-value: 3.4e-68   Bit-score: 264.2
This UCNE has 1 paralogous region in Opossum

Platypus (ornAna1):
Region #1:   chrX3:3747292-3747556   Identity: 95.47%    E-value: 1.9e-65   Bit-score: 254.2

Zebra_finch (taeGut1):
Region #1:   chr2:92234675-92234940   Identity: 95.11%    E-value: 2e-64   Bit-score: 250.1
This UCNE has 2 paralogous regions in Zebra_finch

Lizard (anoCar2):
Region #1:   chrUn_GL343292:862680-862941   Identity: 92.8%    E-value: 7.6e-62   Bit-score: 242
This UCNE has 2 paralogous regions in Lizard

Painted_turtle (chrPic1):
Region #1:   JH584557:3030179-3030431   Identity: 76.95%    E-value: 2.6e-33   Bit-score: 147.8
This UCNE has 1 paralogous region in Painted_turtle

Xenopus (xenTro3):
Region #1:   GL172767:1001771-1002038   Identity: 90.3%    E-value: 2.9e-55   Bit-score: 219.9
This UCNE has 1 paralogous region in Xenopus

Fugu (fr2):
Region #1:   chrUn:76882532-76882793   Identity: 72.18%    E-value: 4.6e-29   Bit-score: 127.5
Region #2:   chrUn:63932883-63933112   Identity: 71.74%    E-value: 2.2e-23   Bit-score: 108.7
This UCNE has 1 paralogous region in Fugu

Medaka (oryLat2):
Region #1:   chr3:28396496-28396751   Identity: 73.75%    E-value: 7.5e-30   Bit-score: 130.3
Region #2:   chr16:8807033-8807289   Identity: 70.04%    E-value: 8e-22   Bit-score: 103.6
This UCNE has 1 paralogous region in Medaka

Stickleback (gasAcu1):
Region #1:   chrII:17170468-17170713   Identity: 73.09%    E-value: 1.2e-28   Bit-score: 126.3
Region #2:   chrXX:6764484-6764734   Identity: 72.91%    E-value: 2.5e-26   Bit-score: 118.6
This UCNE has 1 paralogous region in Stickleback

Tetraodon (tetNig2):
Region #1:   chr5:934282-934527   Identity: 74.5%    E-value: 1.1e-29   Bit-score: 129.5
This UCNE has 1 paralogous region in Tetraodon

Zebrafish (danRer7):
Region #1:   chr16:723669-723908   Identity: 74.21%    E-value: 7.2e-29   Bit-score: 127.8
Region #2:   chr7:35829125-35829332   Identity: 73.02%    E-value: 4.6e-20   Bit-score: 98.6
This UCNE has 1 paralogous region in Zebrafish

Lamprey (petMar1):
Ciona_intestinalis (ci2):
Sea_urchin (strPur2):
Lancelet (braFlo1):