UCNE: IRXA_Akiko_1
(id = 26902)

General information about the entry
Entry location:intergenic
Position:chr5:4628056-4628293
Length:238 nt
Sequence:IRXA_Akiko_1.fasta
Upstream gene:IRX1
Downstream gene:LOC340094
Paralogs:chr16:53760541-53760717
Ultraconserved Genomic Regulatory Block (UGRB): IRXA_cluster: chr5:2112526-4805550
External links:
CONDOR database:CRCNE00006611;
VISTA Enhancer Browser:
UCE (Bejerano et al. 2004):
Other browsers view:[Ensembl] [ECR browser] [Ancora]
Conservation in chicken:
Chicken (galGal3): Region: chr2:90019630-90019866        Identity: >95%
Conservation in other species:
Mouse (mm10):
Region #1:   chr13:71165626-71165862   Identity: 93.25%    E-value: 7.5e-60   Bit-score: 235.9
This UCNE has 1 paralogous region in Mouse

Armadillo (dasNov1):
Region #1:   scaffold_13765:46335-46572   Identity: 96.22%    E-value: 3e-59   Bit-score: 234.1

Opossum (monDom5):
Region #1:   chr3:97896491-97896727   Identity: 96.64%    E-value: 1.6e-62   Bit-score: 245.2
This UCNE has 1 paralogous region in Opossum

Platypus (ornAna1):
Region #1:   chrX3:3019822-3020058   Identity: 95.38%    E-value: 3.1e-60   Bit-score: 236.7

Zebra_finch (taeGut1):
Region #1:   chr2:92853421-92853657   Identity: 94.96%    E-value: 3.6e-60   Bit-score: 235.8
This UCNE has 1 paralogous region in Zebra_finch

Lizard (anoCar2):
Region #1:   chrUn_GL343292:103772-104008   Identity: 93.7%    E-value: 2.2e-58   Bit-score: 230.4

Painted_turtle (chrPic1):
Region #1:   JH584823:1474863-1475099   Identity: 94.54%    E-value: 7.7e-59   Bit-score: 232.4
This UCNE has 1 paralogous region in Painted_turtle

Xenopus (xenTro3):
Region #1:   GL172767:1534766-1534993   Identity: 90.35%    E-value: 5.1e-49   Bit-score: 199

Fugu (fr2):
Region #1:   chrUn:63827771-63828029   Identity: 78.08%    E-value: 2.1e-38   Bit-score: 158.4

Medaka (oryLat2):
Region #1:   chr2:21080812-21081068   Identity: 78.68%    E-value: 9.8e-39   Bit-score: 159.6

Stickleback (gasAcu1):
Region #1:   chrXX:6657639-6657896   Identity: 78.76%    E-value: 2.2e-38   Bit-score: 158.5

Tetraodon (tetNig2):
Zebrafish (danRer7):
Region #1:   chr16:1042131-1042354   Identity: 77.97%    E-value: 1.8e-33   Bit-score: 143

Lamprey (petMar1):
Ciona_intestinalis (ci2):
Sea_urchin (strPur2):
Lancelet (braFlo1):