UCNE: OTP_Frodo
(id = 27399)

General information about the entry
Entry location:intergenic
Position:chr5:77148000-77148435
Length:436 nt
Sequence:OTP_Frodo.fasta
Upstream gene:TBCA
Downstream gene:AP3B1
Paralogs:
Ultraconserved Genomic Regulatory Block (UGRB): OTP_cluster: chr5:76856156-77514616
External links:
CONDOR database:CRCNE00011402; CRCNE00001381; CRCNE00001380;
VISTA Enhancer Browser:hs264;
UCE (Bejerano et al. 2004):uc.159 http://users.soe.ucsc.edu/~jill/ultra.html
Other browsers view:[Ensembl] [ECR browser] [Ancora]
Conservation in chicken:
Chicken (galGal3): Region: chrZ:22495000-22495435        Identity: >95%
Conservation in other species:
Mouse (mm10):
Region #1:   chr13:94702085-94702520   Identity: 99.54%    E-value: 9.2e-89   Bit-score: 332.8

Armadillo (dasNov1):
Region #1:   scaffold_10686:41451-41798   Identity: 98.57%    E-value: 2.7e-62   Bit-score: 245

Opossum (monDom5):
Platypus (ornAna1):
Region #1:   chr1:16646847-16647282   Identity: 97.94%    E-value: 6.1e-91   Bit-score: 339.6
This UCNE has 1 paralogous region in Platypus

Zebra_finch (taeGut1):
Region #1:   chrZ:56614952-56615387   Identity: 99.08%    E-value: 5e-88   Bit-score: 329.2

Lizard (anoCar2):
Region #1:   chr2:13712997-13713454   Identity: 87.77%    E-value: 3.4e-73   Bit-score: 280.5

Painted_turtle (chrPic1):
Region #1:   JH584533:13518045-13518173   Identity: 96.9%    E-value: 3.1e-18   Bit-score: 98.5

Xenopus (xenTro3):
Region #1:   GL173315:70217-70652   Identity: 97.94%    E-value: 2.4e-81   Bit-score: 307.3

Fugu (fr2):
Region #1:   chrUn:73785949-73786358   Identity: 80%    E-value: 3.4e-68   Bit-score: 258.2
Region #2:   chrUn:391999330-391999740   Identity: 78.93%    E-value: 1e-65   Bit-score: 250
Region #3:   chrUn:17512984-17513394   Identity: 78.93%    E-value: 1e-65   Bit-score: 250

Medaka (oryLat2):
Region #1:   chr12:2714855-2715299   Identity: 80.04%    E-value: 4.8e-67   Bit-score: 254.5
Region #2:   chr9:6171730-6172127   Identity: 79.2%    E-value: 2.6e-57   Bit-score: 222.2

Stickleback (gasAcu1):
Region #1:   chrXIII:4501263-4501688   Identity: 80.23%    E-value: 1.4e-67   Bit-score: 256.4
Region #2:   chrXIV:944573-944990   Identity: 79.9%    E-value: 2.1e-65   Bit-score: 249.2

Tetraodon (tetNig2):
Region #1:   chr4:4640202-4640610   Identity: 79.46%    E-value: 8.8e-68   Bit-score: 256.9
Region #2:   chr12:3312632-3313044   Identity: 77.05%    E-value: 1.2e-62   Bit-score: 239.8

Zebrafish (danRer7):
Region #1:   chr21:7453191-7453619   Identity: 86.77%    E-value: 2.1e-63   Bit-score: 243.3
Region #2:   chr5:53481923-53482305   Identity: 74.87%    E-value: 1.4e-34   Bit-score: 147.5

Lamprey (petMar1):
Ciona_intestinalis (ci2):
Sea_urchin (strPur2):
Lancelet (braFlo1):