UCNE: OTP_Lincoln
(id = 27410)

General information about the entry
Entry location:intergenic
Position:chr5:77242395-77242656
Length:262 nt
Sequence:OTP_Lincoln.fasta
Upstream gene:TBCA
Downstream gene:AP3B1
Paralogs:
Ultraconserved Genomic Regulatory Block (UGRB): OTP_cluster: chr5:76856156-77514616
External links:
CONDOR database:CRCNE00011398; CRCNE00001375; CRCNE00011397;
VISTA Enhancer Browser:
UCE (Bejerano et al. 2004):
Other browsers view:[Ensembl] [ECR browser] [Ancora]
Conservation in chicken:
Chicken (galGal3): Region: chrZ:22430200-22430461        Identity: >95%
Conservation in other species:
Mouse (mm10):
Region #1:   chr13:94618869-94619131   Identity: 95.06%    E-value: 1.8e-49   Bit-score: 201.6

Armadillo (dasNov1):
Region #1:   scaffold_6585:45078-45339   Identity: 98.85%    E-value: 1.3e-50   Bit-score: 205.4

Opossum (monDom5):
Region #1:   chr3:38487464-38487725   Identity: 98.09%    E-value: 5.8e-50   Bit-score: 203.6

Platypus (ornAna1):
Region #1:   chr1:16682120-16682381   Identity: 94.66%    E-value: 8.6e-51   Bit-score: 205.5

Zebra_finch (taeGut1):
Region #1:   chrZ:56560744-56561005   Identity: 95.82%    E-value: 1.9e-49   Bit-score: 200.4

Lizard (anoCar2):
Region #1:   chr2:13617849-13618110   Identity: 96.58%    E-value: 4.1e-55   Bit-score: 219.7

Painted_turtle (chrPic1):
Region #1:   JH584533:13614237-13614497   Identity: 98.47%    E-value: 1.3e-51   Bit-score: 208.6

Xenopus (xenTro3):
Region #1:   GL173817:139352-139592   Identity: 90.91%    E-value: 7.8e-38   Bit-score: 162
This UCNE has 1 paralogous region in Xenopus

Fugu (fr2):
Region #1:   chrUn:73776721-73776861   Identity: 86.52%    E-value: 6.9e-23   Bit-score: 107
Region #2:   chrUn:17507723-17507849   Identity: 70.15%    E-value: 0.00000013   Bit-score: 56.2

Medaka (oryLat2):
Region #1:   chr12:2733601-2733739   Identity: 78.42%    E-value: 0.00000000000001   Bit-score: 79.9
Region #2:   chr9:6182148-6182274   Identity: 68.66%    E-value: 0.0000033   Bit-score: 51.7

Stickleback (gasAcu1):
Region #1:   chrXIII:4508655-4508783   Identity: 69.77%    E-value: 0.00000065   Bit-score: 54.1

Tetraodon (tetNig2):
Region #1:   chr4:4648403-4648536   Identity: 85.07%    E-value: 3.2e-20   Bit-score: 98.1
Region #2:   chr12:3307478-3307606   Identity: 71.32%    E-value: 0.00000002   Bit-score: 58.9

Zebrafish (danRer7):
Region #1:   chr5:53503074-53503249   Identity: 75.84%    E-value: 0.0000000000025   Bit-score: 72.9
Region #2:   chr7:29236211-29236335   Identity: 79.2%    E-value: 0.0000000014   Bit-score: 63.7

Lamprey (petMar1):
Ciona_intestinalis (ci2):
Sea_urchin (strPur2):
Lancelet (braFlo1):