General information about the entry |
Entry location: | intron |
Position: | chr5:93222700-93222975  |
Length: | 276 nt |
Sequence: | NR2F1_Nagasawa.fasta |
Overlapping gene: | FAM172A |
Paralogs: | chr15:97348114-97348327
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Ultraconserved Genomic Regulatory Block (UGRB): |
NR2F1_cluster: chr5:90903471-94229447  |
External links: |
CONDOR database: | |
VISTA Enhancer Browser: | |
UCE (Bejerano et al. 2004): | |
Other browsers view: | [Ensembl]
[ECR browser]
[Ancora]
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Conservation in chicken: |
Chicken (galGal3): | Region: chrZ:57125454-57125728        Identity: >95%This UCNE has 1 paralogous region in Chicken
Paralog #1:   chr10:17922653-17922880   Identity: 67.1%
   E-value: 0.0000000000005   Bit-score: 79.2 |
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Conservation in other species: |
Mouse (mm10): | Region #1:   chr13:77897670-77897945   Identity: 97.46%
   E-value: 5.5e-64   Bit-score: 249.8 |
This UCNE has 1 paralogous region in Mouse
Paralog #1:   chr7:69888376-69888595   Identity: 66.96%
   E-value: 0.0000000000034   Bit-score: 77.8 |
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Armadillo (dasNov1): | Region #1:   scaffold_3028:28250-28525   Identity: 98.55%
   E-value: 3.5e-58   Bit-score: 230.7 |
This UCNE has 1 paralogous region in Armadillo
Paralog #1:   scaffold_1082:82212-82438   Identity: 68.4%
   E-value: 0.0000000000046   Bit-score: 77.5 |
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Opossum (monDom5): | Region #1:   chr3:208428639-208428918   Identity: 95.71%
   E-value: 4.3e-61   Bit-score: 240.6 |
This UCNE has 1 paralogous region in Opossum
Paralog #1:   chr1:134278817-134279044   Identity: 69.26%
   E-value: 0.0000000000000031   Bit-score: 88.3 |
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Platypus (ornAna1): | Region #1:   chr1:2874246-2874521   Identity: 97.46%
   E-value: 5.6e-56   Bit-score: 222.8 |
This UCNE has 1 paralogous region in Platypus
Paralog #1:   chr5:12453138-12453351   Identity: 70.05%
   E-value: 0.00000000000036   Bit-score: 80.5 |
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Zebra_finch (taeGut1): | Region #1:   chrZ:14279216-14279486   Identity: 95.2%
   E-value: 1.6e-59   Bit-score: 233.9 |
This UCNE has 2 paralogous regions in Zebra_finch
Paralog #1:   chr10:16523728-16523955   Identity: 67.97%
   E-value: 0.00000000000002   Bit-score: 84.1 |
Paralog #2:   chrUn:106595134-106595361   Identity: 67.97%
   E-value: 0.00000000000002   Bit-score: 84.1 |
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Lizard (anoCar2): | Region #1:   chr2:25073059-25073334   Identity: 93.84%
   E-value: 4.4e-60   Bit-score: 236.2 |
This UCNE has 1 paralogous region in Lizard
Paralog #1:   chrUn_GL343363:417792-418005   Identity: 68.2%
   E-value: 0.000000000000061   Bit-score: 83 |
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Painted_turtle (chrPic1): | Region #1:   JH584819:1846197-1846472   Identity: 96.74%
   E-value: 4.2e-60   Bit-score: 236.9 |
This UCNE has 1 paralogous region in Painted_turtle
Paralog #1:   JH584649:3628572-3628799   Identity: 67.53%
   E-value: 0.00000000000049   Bit-score: 80.5 |
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Xenopus (xenTro3): | Region #1:   GL172694:723014-723275   Identity: 90.08%
   E-value: 1.6e-46   Bit-score: 191 |
This UCNE has 1 paralogous region in Xenopus
Paralog #1:   GL172689:745759-745893   Identity: 71.01%
   E-value: 0.000047   Bit-score: 53.2 |
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Fugu (fr2): | Region #1:   chrUn:174401713-174401949   Identity: 79.67%
   E-value: 9.2e-36   Bit-score: 149.8 |
This UCNE has 1 paralogous region in Fugu
Paralog #1:   chrUn:260946442-260946648   Identity: 65.09%
   E-value: 0.00000000021   Bit-score: 65.6 |
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Medaka (oryLat2): | Region #1:   chr9:15506328-15506574   Identity: 79.03%
   E-value: 1.2e-35   Bit-score: 149.6 |
This UCNE has 1 paralogous region in Medaka
Paralog #1:   chr6:13644781-13644987   Identity: 65.55%
   E-value: 0.00000000003   Bit-score: 68.5 |
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Stickleback (gasAcu1): | Region #1:   chrXIII:11093268-11093515   Identity: 77.69%
   E-value: 9.5e-34   Bit-score: 143.4 |
This UCNE has 1 paralogous region in Stickleback
Paralog #1:   chrXIX:17179720-17179926   Identity: 63.68%
   E-value: 0.00000004   Bit-score: 58.2 |
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Tetraodon (tetNig2): | This UCNE has 1 paralogous region in Tetraodon
Paralog #1:   chr13:3284489-3284716   Identity: 63.33%
   E-value: 0.0000000012   Bit-score: 63.1 |
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Zebrafish (danRer7): | Region #1:   chr5:51755409-51755673   Identity: 72.86%
   E-value: 8.1e-28   Bit-score: 124.4 |
This UCNE has 1 paralogous region in Zebrafish
Paralog #1:   chr18:23457406-23457628   Identity: 63.56%
   E-value: 0.0000000091   Bit-score: 61.1 |
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Lamprey (petMar1): | Region #1:   Contig1226:46578-46762   Identity: 72.19%
   E-value: 0.0000000000000041   Bit-score: 86 |
Region #2:   Contig18049:563-730   Identity: 74.71%
   E-value: 0.0000000000000068   Bit-score: 85.3 |
Region #3:   Contig37076:5882-6149   Identity: 62.59%
   E-value: 0.00000000000053   Bit-score: 79 |
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Ciona_intestinalis (ci2): |
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Sea_urchin (strPur2): |
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Lancelet (braFlo1): |
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