Ultraconserved Gene Regulatory Blocks

UCNE: NR2F1_Vanessa
(id = 27832)

General information about the entry

Entry location:

intron

Position:

chr5:93817229-93817508

Length:

280 nt

Sequence:

NR2F1_Vanessa.fasta

Overlapping gene:

C5orf36

Paralogs:

Ultraconserved Genomic Regulatory Block (UGRB):

NR2F1_cluster: chr5:90903471-94229447

External links:

CONDOR database:

VISTA Enhancer Browser:

UCE (Bejerano et al. 2004):

Other browsers view:

[Ensembl] [ECR browser] [Ancora]

Conservation in chicken:

Chicken (galGal3):

Region: chrZ:56811554-56811834 Identity: >95%

Conservation in other species:

Mouse (mm10):

Region #1: chr13:77248933-77249211 Identity: 97.85% E-value: 1.1e-76 Bit-score: 292.1

Armadillo (dasNov1):

Opossum (monDom5):

Region #1: chr3:207685671-207685950 Identity: 95.36% E-value: 3.7e-71 Bit-score: 274.1

Platypus (ornAna1):

Region #1: chr1:2487445-2487724 Identity: 93.93% E-value: 2.6e-65 Bit-score: 253.8

Zebra_finch (taeGut1):

Region #1: chrZ:14580246-14580525 Identity: 95.36% E-value: 3.6e-71 Bit-score: 272.6

Lizard (anoCar2):

Region #1: chr2:25361040-25361320 Identity: 94.66% E-value: 4.5e-70 Bit-score: 269.5

Painted_turtle (chrPic1):

Region #1: JH584819:1399392-1399671 Identity: 96.43% E-value: 3.3e-64 Bit-score: 250.5

This UCNE has 6 paralogous regions in Painted_turtle

Xenopus (xenTro3):

Region #1: GL172910:5016-5281 Identity: 61.57% E-value: 0.0000000000012 Bit-score: 78.4

This UCNE has 125 paralogous regions in Xenopus

Paralog #1: GL172924:418258-418526 Identity: 61.85% E-value: 0.0000000000017 Bit-score: 77.9

Paralog #2: GL172748:1767883-1768154 Identity: 60.58% E-value: 0.0000000000099 Bit-score: 75.4

Paralog #3: GL172671:543864-544136 Identity: 60.36% E-value: 0.000000000017 Bit-score: 74.6

Paralog #4: GL172650:1275137-1275408 Identity: 60.73% E-value: 0.000000000025 Bit-score: 74.1

Paralog #5: GL173205:367686-367951 Identity: 60.97% E-value: 0.000000000037 Bit-score: 73.5

Paralog #6: GL172651:3897423-3897688 Identity: 60.45% E-value: 0.000000000049 Bit-score: 73.1

Paralog #7: GL172685:2049263-2049526 Identity: 61.05% E-value: 0.00000000021 Bit-score: 71

Paralog #8: GL173427:141510-141773 Identity: 59.09% E-value: 0.00000000031 Bit-score: 70.4

Paralog #9: GL173177:299004-299272 Identity: 60.36% E-value: 0.00000000041 Bit-score: 70

Paralog #10: GL172711:2573496-2573770 Identity: 60.36% E-value: 0.0000000008 Bit-score: 69.1

Paralog #11: GL172655:144688-144959 Identity: 59.12% E-value: 0.0000000012 Bit-score: 68.5

Paralog #12: GL172665:3130576-3130829 Identity: 59.61% E-value: 0.0000000016 Bit-score: 68.1

Paralog #13: GL172692:2552734-2552997 Identity: 59.18% E-value: 0.0000000035 Bit-score: 67

Paralog #14: GL172876:515117-515380 Identity: 59.18% E-value: 0.0000000035 Bit-score: 67

Paralog #15: GL173129:466848-467121 Identity: 58.7% E-value: 0.0000000035 Bit-score: 67

Paralog #16: GL172707:3100100-3100363 Identity: 61.76% E-value: 0.0000000045 Bit-score: 66.6

Paralog #17: GL172758:214001-214271 Identity: 60.87% E-value: 0.0000000077 Bit-score: 65.8

Paralog #18: GL173162:120506-120782 Identity: 58.01% E-value: 0.000000015 Bit-score: 64.8

Paralog #19: GL173441:369665-369875 Identity: 61.86% E-value: 0.000000033 Bit-score: 63.7

Paralog #20: GL172954:134509-134772 Identity: 57.58% E-value: 0.000000038 Bit-score: 63.5

Paralog #21: GL172715:1351328-1351602 Identity: 57.45% E-value: 0.00000005 Bit-score: 63.1

Paralog #22: GL172648:4205707-4205971 Identity: 57.89% E-value: 0.00000005 Bit-score: 63.1

Paralog #23: GL173034:755525-755798 Identity: 57.14% E-value: 0.000000065 Bit-score: 62.7

Paralog #24: GL173416:150204-150478 Identity: 58.57% E-value: 0.000000065 Bit-score: 62.7

Paralog #25: GL172655:4565336-4565589 Identity: 57.87% E-value: 0.000000074 Bit-score: 62.5

Paralog #26: GL172879:1650476-1650749 Identity: 57.82% E-value: 0.000000074 Bit-score: 62.5

Paralog #27: GL173847:106645-106906 Identity: 59.77% E-value: 0.000000074 Bit-score: 62.5

Paralog #28: GL172833:63687-63959 Identity: 57.82% E-value: 0.000000074 Bit-score: 62.5

Paralog #29: GL173212:417313-417548 Identity: 59.92% E-value: 0.000000085 Bit-score: 62.3

Paralog #30: GL172665:3357570-3357834 Identity: 57.68% E-value: 0.000000085 Bit-score: 62.3

Paralog #31: GL173212:443553-443788 Identity: 59.92% E-value: 0.000000085 Bit-score: 62.3

Paralog #32: GL172808:1062384-1062636 Identity: 58.2% E-value: 0.000000097 Bit-score: 62.2

Paralog #33: GL172652:5423137-5423391 Identity: 58.53% E-value: 0.00000012 Bit-score: 61.8

Paralog #34: GL173046:770834-771089 Identity: 58.53% E-value: 0.00000013 Bit-score: 61.8

Paralog #35: GL172697:1719118-1719370 Identity: 58.59% E-value: 0.00000014 Bit-score: 61.6

Paralog #36: GL172875:960607-960859 Identity: 58.59% E-value: 0.00000014 Bit-score: 61.6

Paralog #37: GL173621:214022-214274 Identity: 58.59% E-value: 0.00000014 Bit-score: 61.6

Paralog #38: GL172666:166564-166828 Identity: 59.26% E-value: 0.00000019 Bit-score: 61.2

Paralog #39: GL172879:1373808-1373997 Identity: 62.5% E-value: 0.00000019 Bit-score: 61.2

Paralog #40: GL172669:2468234-2468485 Identity: 58.98% E-value: 0.00000022 Bit-score: 61

Paralog #41: GL173011:422153-422404 Identity: 58.98% E-value: 0.00000022 Bit-score: 61

Paralog #42: GL173404:140992-141245 Identity: 57.48% E-value: 0.00000025 Bit-score: 60.8

Paralog #43: GL174067:54452-54725 Identity: 59.86% E-value: 0.00000025 Bit-score: 60.8

Paralog #44: GL172695:3407864-3408129 Identity: 58.15% E-value: 0.00000028 Bit-score: 60.6

Paralog #45: GL173043:117071-117333 Identity: 57.95% E-value: 0.00000028 Bit-score: 60.6

Paralog #46: GL172830:1655500-1655763 Identity: 59.63% E-value: 0.00000028 Bit-score: 60.6

Paralog #47: GL172977:963060-963323 Identity: 57.36% E-value: 0.00000032 Bit-score: 60.4

Paralog #48: GL181779:368-631 Identity: 56.82% E-value: 0.00000039 Bit-score: 60.2

Paralog #49: GL174122:57736-57999 Identity: 57.68% E-value: 0.00000042 Bit-score: 60

Paralog #50: GL173660:112283-112546 Identity: 57.68% E-value: 0.00000042 Bit-score: 60

Paralog #51: GL172690:681402-681675 Identity: 56.2% E-value: 0.00000072 Bit-score: 59.3

Paralog #52: GL181350:1500-1773 Identity: 59.51% E-value: 0.00000075 Bit-score: 59.2

Paralog #53: GL173453:33974-34227 Identity: 57.09% E-value: 0.00000082 Bit-score: 59.1

Paralog #54: GL172657:1992573-1992846 Identity: 58.72% E-value: 0.00000082 Bit-score: 59.1

Paralog #55: GL172904:1345400-1345657 Identity: 57.63% E-value: 0.0000011 Bit-score: 58.7

Paralog #56: GL173090:505680-505928 Identity: 58.1% E-value: 0.0000011 Bit-score: 58.7

Paralog #57: GL173009:286420-286662 Identity: 59.59% E-value: 0.0000012 Bit-score: 58.5

Paralog #58: GL172937:1024352-1024606 Identity: 56.86% E-value: 0.0000014 Bit-score: 58.3

Paralog #59: GL173563:49667-49930 Identity: 57.36% E-value: 0.0000016 Bit-score: 58.1

Paralog #60: GL173070:575921-576193 Identity: 57.76% E-value: 0.0000016 Bit-score: 58.1

Paralog #61: GL172757:237697-237952 Identity: 57.2% E-value: 0.0000018 Bit-score: 57.9

Paralog #62: GL173350:327130-327397 Identity: 59.27% E-value: 0.0000018 Bit-score: 57.9

Paralog #63: GL172674:739275-739490 Identity: 59.36% E-value: 0.0000021 Bit-score: 57.7

Paralog #64: GL183911:2457-2731 Identity: 57.55% E-value: 0.0000023 Bit-score: 57.6

Paralog #65: GL172924:527138-527394 Identity: 57.53% E-value: 0.0000024 Bit-score: 57.5

Paralog #66: GL173475:68055-68340 Identity: 57.14% E-value: 0.0000027 Bit-score: 57.3

Paralog #67: GL173047:647344-647614 Identity: 58.18% E-value: 0.0000027 Bit-score: 57.3

Paralog #68: GL172752:1426506-1426755 Identity: 60.08% E-value: 0.0000031 Bit-score: 57.2

Paralog #69: GL172787:237708-237974 Identity: 56.55% E-value: 0.0000031 Bit-score: 57.2

Paralog #70: GL183675:430-672 Identity: 59.18% E-value: 0.0000035 Bit-score: 57

Paralog #71: GL172767:1592297-1592570 Identity: 57.04% E-value: 0.0000035 Bit-score: 57

Paralog #72: GL172641:4798074-4798333 Identity: 60.66% E-value: 0.000004 Bit-score: 56.8

Paralog #73: GL172649:4215866-4216115 Identity: 58.66% E-value: 0.000004 Bit-score: 56.8

Paralog #74: GL172731:922589-922861 Identity: 55.68% E-value: 0.0000046 Bit-score: 56.6

Paralog #75: GL173244:427610-427864 Identity: 56.47% E-value: 0.0000046 Bit-score: 56.6

Paralog #76: GL173120:430550-430813 Identity: 56.93% E-value: 0.0000046 Bit-score: 56.6

Paralog #77: GL174134:41651-41912 Identity: 56.11% E-value: 0.0000053 Bit-score: 56.4

Paralog #78: GL172937:1109565-1109827 Identity: 56.98% E-value: 0.0000053 Bit-score: 56.4

Paralog #79: GL173252:388287-388549 Identity: 56.98% E-value: 0.0000053 Bit-score: 56.4

Paralog #80: GL172655:4867295-4867559 Identity: 58.74% E-value: 0.000006 Bit-score: 56.2

Paralog #81: GL173464:140676-140940 Identity: 58.74% E-value: 0.000006 Bit-score: 56.2

Paralog #82: GL172734:2413789-2414053 Identity: 58.74% E-value: 0.000006 Bit-score: 56.2

Paralog #83: GL172951:1362933-1363197 Identity: 58.74% E-value: 0.000006 Bit-score: 56.2

Paralog #84: GL173163:114370-114644 Identity: 56.27% E-value: 0.0000069 Bit-score: 56

Paralog #85: GL172811:695250-695523 Identity: 55.47% E-value: 0.0000079 Bit-score: 55.8

Paralog #86: GL172692:2925815-2926071 Identity: 57.14% E-value: 0.0000079 Bit-score: 55.8

Paralog #87: GL172667:1301906-1302148 Identity: 58.78% E-value: 0.000009 Bit-score: 55.6

Paralog #88: GL172769:375760-376000 Identity: 57.72% E-value: 0.00001 Bit-score: 55.4

Paralog #89: GL172803:1752616-1752878 Identity: 56.82% E-value: 0.00001 Bit-score: 55.4

Paralog #90: GL173153:496463-496703 Identity: 57.72% E-value: 0.00001 Bit-score: 55.4

Paralog #91: GL173366:138655-138911 Identity: 58.4% E-value: 0.000012 Bit-score: 55.2

Paralog #92: GL172934:1360152-1360398 Identity: 58.89% E-value: 0.000012 Bit-score: 55.2

Paralog #93: GL173238:393511-393773 Identity: 57.74% E-value: 0.000012 Bit-score: 55.2

Paralog #94: GL172745:2630124-2630380 Identity: 58.4% E-value: 0.000012 Bit-score: 55.2

Paralog #95: GL173228:150530-150772 Identity: 58.78% E-value: 0.000013 Bit-score: 55

Paralog #96: GL172937:1103263-1103525 Identity: 56.6% E-value: 0.000018 Bit-score: 54.7

Paralog #97: GL173097:96443-96707 Identity: 55.97% E-value: 0.000018 Bit-score: 54.7

Paralog #98: GL187004:68-341 Identity: 58.95% E-value: 0.000018 Bit-score: 54.6

Paralog #99: GL172910:660767-661014 Identity: 58.66% E-value: 0.00002 Bit-score: 54.5

Paralog #100: GL172809:351633-351883 Identity: 58.98% E-value: 0.000026 Bit-score: 54.1

Paralog #101: GL173115:145370-145634 Identity: 55.47% E-value: 0.000026 Bit-score: 54.1

Paralog #102: GL172911:19220-19480 Identity: 57.89% E-value: 0.00003 Bit-score: 53.9

Paralog #103: GL172649:992464-992676 Identity: 58.6% E-value: 0.00003 Bit-score: 53.9

Paralog #104: GL172965:291929-292194 Identity: 57.25% E-value: 0.00003 Bit-score: 53.9

Paralog #105: GL173034:242778-242990 Identity: 58.6% E-value: 0.00003 Bit-score: 53.9

Paralog #106: GL174380:2438-2688 Identity: 58.62% E-value: 0.000031 Bit-score: 53.8

Paralog #107: GL173159:587540-587790 Identity: 57.75% E-value: 0.000034 Bit-score: 53.7

Paralog #108: GL172640:649281-649519 Identity: 58.75% E-value: 0.000034 Bit-score: 53.7

Paralog #109: GL173071:88615-88891 Identity: 57.09% E-value: 0.000034 Bit-score: 53.7

Paralog #110: GL173124:256227-256499 Identity: 55.43% E-value: 0.000034 Bit-score: 53.7

Paralog #111: GL173726:17589-17845 Identity: 58.02% E-value: 0.000039 Bit-score: 53.5

Paralog #112: GL173032:31817-32073 Identity: 58.02% E-value: 0.000039 Bit-score: 53.5

Paralog #113: GL173032:198752-199008 Identity: 58.02% E-value: 0.000039 Bit-score: 53.5

Paralog #114: GL174240:41548-41748 Identity: 59.02% E-value: 0.000049 Bit-score: 53.2

Paralog #115: GL172642:3837534-3837734 Identity: 58.71% E-value: 0.000051 Bit-score: 53.1

Paralog #116: GL172937:1364149-1364423 Identity: 55.8% E-value: 0.000051 Bit-score: 53.1

Paralog #117: GL172767:1586776-1587012 Identity: 59.17% E-value: 0.000051 Bit-score: 53.1

Paralog #118: GL172937:866108-866371 Identity: 57.09% E-value: 0.000058 Bit-score: 52.9

Paralog #119: GL172809:382719-382918 Identity: 59.11% E-value: 0.000066 Bit-score: 52.7

Paralog #120: GL172776:891847-892083 Identity: 58.58% E-value: 0.000066 Bit-score: 52.7

Paralog #121: GL172710:2399769-2399969 Identity: 59.42% E-value: 0.000076 Bit-score: 52.5

Paralog #122: GL172715:2573381-2573640 Identity: 56.65% E-value: 0.000099 Bit-score: 52.2

Paralog #123: GL172908:393633-393884 Identity: 59.53% E-value: 0.000099 Bit-score: 52.2

Paralog #124: GL172834:1852000-1852278 Identity: 55.87% E-value: 0.000099 Bit-score: 52.2

Paralog #125: GL172935:1000619-1000856 Identity: 57.32% E-value: 0.000099 Bit-score: 52.2

Fugu (fr2):

Medaka (oryLat2):

Stickleback (gasAcu1):

Tetraodon (tetNig2):

Zebrafish (danRer7):

Lamprey (petMar1):

Region #1: Contig12522:17571-17787 Identity: 58.37% E-value: 0.0000037 Bit-score: 56.2

Ciona_intestinalis (ci2):

Sea_urchin (strPur2):

Lancelet (braFlo1):

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UCNE: NR2F1_Vanessa (id = 27832)

UCNE: NR2F1_Vanessa
(id = 27832)