General information about the entry |
Entry location: | UTR |
Position: | chr5:132211145-132211450  |
Length: | 306 nt |
Sequence: | chr5_Gandalf.fasta |
Overlapping gene: | AFF4 |
Paralogs: | chr18:63804909-63805210 chr2:229837600-229837910
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External links: |
CONDOR database: | |
VISTA Enhancer Browser: | |
UCE (Bejerano et al. 2004): | |
Other browsers view: | [Ensembl]
[ECR browser]
[Ancora]
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Conservation in chicken: |
Chicken (galGal3): | Region: chr13:17661529-17661833        Identity: >95%
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Conservation in other species: |
Mouse (mm10): | Region #1:   chr11:53420881-53421184   Identity: 96.41%
   E-value: 6.1e-39   Bit-score: 166.8 |
This UCNE has 9 paralogous regions in Mouse
Paralog #1:   chr14:75104724-75105012   Identity: 78.33%
   E-value: 1.3e-19   Bit-score: 102.6 |
Paralog #2:   chr11:7665734-7666022   Identity: 76.35%
   E-value: 1.2e-16   Bit-score: 92.7 |
Paralog #3:   chrX:91389586-91389776   Identity: 83.16%
   E-value: 0.0000000000012   Bit-score: 79.4 |
Paralog #4:   chrX:91936052-91936242   Identity: 82.65%
   E-value: 0.0000000000024   Bit-score: 78.4 |
Paralog #5:   chrX:91476866-91477056   Identity: 82.65%
   E-value: 0.0000000000024   Bit-score: 78.4 |
Paralog #6:   chr11:67225461-67225708   Identity: 69.06%
   E-value: 0.000000000024   Bit-score: 75.1 |
Paralog #7:   chr19:33308366-33308614   Identity: 70.5%
   E-value: 0.0000000085   Bit-score: 66.6 |
Paralog #8:   chr3:36003260-36003519   Identity: 67.72%
   E-value: 0.00000059   Bit-score: 60.5 |
Paralog #9:   chr14:37920566-37920762   Identity: 69.76%
   E-value: 0.000021   Bit-score: 55.4 |
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Armadillo (dasNov1): | Region #1:   scaffold_1780:44551-44851   Identity: 96.41%
   E-value: 2.6e-37   Bit-score: 161.5 |
Region #2:   scaffold_23568:16690-16993   Identity: 87.25%
   E-value: 2.9e-29   Bit-score: 134.8 |
Region #3:   scaffold_1462:105930-106234   Identity: 80.32%
   E-value: 2.1e-22   Bit-score: 112 |
Region #4:   scaffold_6108:40864-41004   Identity: 88.73%
   E-value: 0.0000000011   Bit-score: 69.8 |
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Opossum (monDom5): | Region #1:   chr1:308083856-308084161   Identity: 92.23%
   E-value: 3.2e-29   Bit-score: 134.9 |
This UCNE has 1 paralogous region in Opossum
Paralog #1:   chrUn:6587197-6587481   Identity: 76.08%
   E-value: 0.0000000000000042   Bit-score: 88 |
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Platypus (ornAna1): | Region #1:   Ultra459:485526-485833   Identity: 93.55%
   E-value: 4.5e-44   Bit-score: 183.4 |
This UCNE has 1 paralogous region in Platypus
Paralog #1:   chr3:23803048-23803276   Identity: 66.4%
   E-value: 0.0000000052   Bit-score: 66.9 |
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Zebra_finch (taeGut1): | Region #1:   chr13:1153016-1153320   Identity: 94.48%
   E-value: 2.6e-39   Bit-score: 166.9 |
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Lizard (anoCar2): | Region #1:   chr2:127283315-127283613   Identity: 90%
   E-value: 3.3e-39   Bit-score: 167 |
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Painted_turtle (chrPic1): | Region #1:   JH584738:529644-529947   Identity: 94.46%
   E-value: 6.8e-39   Bit-score: 166.6 |
This UCNE has 1 paralogous region in Painted_turtle
Paralog #1:   JH584728:2451772-2452006   Identity: 64.39%
   E-value: 0.000045   Bit-score: 54.2 |
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Xenopus (xenTro3): | Region #1:   GL172775:171362-171682   Identity: 72.76%
   E-value: 6.4e-17   Bit-score: 92.8 |
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Fugu (fr2): |
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Medaka (oryLat2): |
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Stickleback (gasAcu1): |
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Tetraodon (tetNig2): |
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Zebrafish (danRer7): |
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Lamprey (petMar1): |
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Ciona_intestinalis (ci2): |
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Sea_urchin (strPur2): |
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Lancelet (braFlo1): |
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