General information about the entry |
Entry location: | UTR |
Position: | chr5:133726210-133726433  |
Length: | 224 nt |
Sequence: | SAR1B_Evelyn.fasta |
Overlapping gene: | UBE2B |
Paralogs: | |
Ultraconserved Genomic Regulatory Block (UGRB): |
SAR1B_cluster: chr5:133726210-134600344  |
External links: |
CONDOR database: | |
VISTA Enhancer Browser: | |
UCE (Bejerano et al. 2004): | uc.173 http://users.soe.ucsc.edu/~jill/ultra.html |
Other browsers view: | [Ensembl]
[ECR browser]
[Ancora]
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Conservation in chicken: |
Chicken (galGal3): | Region: chr13:16292361-16292585        Identity: >95%This UCNE has 1 paralogous region in Chicken
Paralog #1:   chr13:16299550-16299774   Identity: 95.58%
   E-value: 2.3e-27   Bit-score: 126.6 |
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Conservation in other species: |
Mouse (mm10): | Region #1:   chr11:51986296-51986519   Identity: 100%
   E-value: 4.9e-31   Bit-score: 140.1 |
This UCNE has 2 paralogous regions in Mouse
Paralog #1:   chr11:87945182-87945394   Identity: 88.39%
   E-value: 4.5e-21   Bit-score: 107 |
Paralog #2:   chr9:38103015-38103216   Identity: 70.51%
   E-value: 0.0000018   Bit-score: 58.5 |
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Armadillo (dasNov1): | Region #1:   scaffold_9313:18744-18967   Identity: 99.11%
   E-value: 9.6e-26   Bit-score: 122.6 |
Region #2:   scaffold_286614:756-976   Identity: 94.67%
   E-value: 1.1e-21   Bit-score: 109.2 |
Region #3:   scaffold_62894:9862-10081   Identity: 88.84%
   E-value: 9.6e-18   Bit-score: 96.1 |
Region #4:   scaffold_33081:1895-2112   Identity: 87.27%
   E-value: 3.5e-17   Bit-score: 94.2 |
Region #5:   scaffold_192184:398-586   Identity: 85.79%
   E-value: 0.0000000000027   Bit-score: 78 |
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Opossum (monDom5): | Region #1:   chr1:302691978-302692203   Identity: 96.9%
   E-value: 9.3e-20   Bit-score: 103 |
This UCNE has 6 paralogous regions in Opossum
Paralog #1:   chr3:394742798-394743023   Identity: 94.69%
   E-value: 1.5e-18   Bit-score: 99.1 |
Paralog #2:   chr2:41581226-41581446   Identity: 92.44%
   E-value: 6.5e-17   Bit-score: 93.6 |
Paralog #3:   chr3:519909021-519909255   Identity: 82.92%
   E-value: 0.0000000000016   Bit-score: 79 |
Paralog #4:   chr1:563416501-563416725   Identity: 82.46%
   E-value: 0.0000000000082   Bit-score: 76.6 |
Paralog #5:   chr2:412391406-412391572   Identity: 87.15%
   E-value: 0.0000000023   Bit-score: 68.5 |
Paralog #6:   chr1:397311326-397311522   Identity: 76.55%
   E-value: 0.000000085   Bit-score: 63.3 |
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Platypus (ornAna1): | Region #1:   Ultra364:128062-128287   Identity: 97.35%
   E-value: 2e-32   Bit-score: 144.2 |
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Zebra_finch (taeGut1): | Region #1:   chr13:10088220-10088442   Identity: 96.89%
   E-value: 5.5e-29   Bit-score: 132.2 |
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Lizard (anoCar2): | Region #1:   chr2:130945337-130945563   Identity: 92.95%
   E-value: 3.7e-30   Bit-score: 136.6 |
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Painted_turtle (chrPic1): | Region #1:   JH584897:1223991-1224213   Identity: 96.44%
   E-value: 1.9e-26   Bit-score: 124.8 |
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Xenopus (xenTro3): | Region #1:   GL172813:1501817-1502033   Identity: 71.49%
   E-value: 0.000000033   Bit-score: 63.4 |
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Fugu (fr2): |
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Medaka (oryLat2): |
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Stickleback (gasAcu1): |
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Tetraodon (tetNig2): |
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Zebrafish (danRer7): |
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Lamprey (petMar1): |
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Ciona_intestinalis (ci2): |
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Sea_urchin (strPur2): |
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Lancelet (braFlo1): |
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