General information about the entry |
Entry location: | UTR |
Position: | chr5:139006387-139006588  |
Length: | 202 nt |
Sequence: | chr5_Jacob.fasta |
Overlapping gene: | UBE2D2 |
Paralogs: | chr1:174635751-174635883 chr12:16617764-16617967 chr5:91247981-91248147 chr6:25182325-25182474 chrX:6315885-6316069
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External links: |
CONDOR database: | |
VISTA Enhancer Browser: | |
UCE (Bejerano et al. 2004): | |
Other browsers view: | [Ensembl]
[ECR browser]
[Ancora]
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Conservation in chicken: |
Chicken (galGal3): | Region: chr13:918263-918466        Identity: >95%
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Conservation in other species: |
Mouse (mm10): | Region #1:   chr18:35805565-35805768   Identity: 97.55%
   E-value: 7.8e-50   Bit-score: 202.4 |
This UCNE has 3 paralogous regions in Mouse
Paralog #1:   chr3:78966153-78966356   Identity: 97.06%
   E-value: 2.8e-49   Bit-score: 200.5 |
Paralog #2:   chr1:102688932-102689133   Identity: 89.11%
   E-value: 1.9e-40   Bit-score: 171.2 |
Paralog #3:   chr5:107830931-107831111   Identity: 73.08%
   E-value: 4.1e-16   Bit-score: 90.3 |
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Armadillo (dasNov1): | Region #1:   scaffold_13112:8616-8817   Identity: 99.01%
   E-value: 8.1e-49   Bit-score: 199.1 |
Region #2:   scaffold_57546:9634-9781   Identity: 88.67%
   E-value: 8.5e-25   Bit-score: 119.3 |
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Opossum (monDom5): | Region #1:   chr1:330938157-330938359   Identity: 98.03%
   E-value: 2e-48   Bit-score: 198.1 |
This UCNE has 3 paralogous regions in Opossum
Paralog #1:   chr2:293569945-293570146   Identity: 90.15%
   E-value: 5.6e-39   Bit-score: 166.7 |
Paralog #2:   chr3:116154654-116154848   Identity: 76.35%
   E-value: 5.5e-23   Bit-score: 113.6 |
Paralog #3:   chr1:278107899-278108059   Identity: 64.32%
   E-value: 0.00000053   Bit-score: 60.5 |
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Platypus (ornAna1): |
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Zebra_finch (taeGut1): | Region #1:   chr13:15782978-15783181   Identity: 98.04%
   E-value: 2e-49   Bit-score: 199.9 |
This UCNE has 1 paralogous region in Zebra_finch
Paralog #1:   chr8:3487446-3487621   Identity: 68.37%
   E-value: 0.0000000000021   Bit-score: 76.9 |
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Lizard (anoCar2): | Region #1:   chr4:79233458-79233652   Identity: 92.61%
   E-value: 8.3e-41   Bit-score: 171.8 |
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Painted_turtle (chrPic1): | Region #1:   JH584434:1362298-1362499   Identity: 97.52%
   E-value: 1.2e-48   Bit-score: 198.3 |
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Xenopus (xenTro3): |
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Fugu (fr2): |
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Medaka (oryLat2): |
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Stickleback (gasAcu1): | Region #1:   chrIV:16171227-16171378   Identity: 62.58%
   E-value: 0.000029   Bit-score: 48.2 |
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Tetraodon (tetNig2): |
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Zebrafish (danRer7): |
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Lamprey (petMar1): |
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Ciona_intestinalis (ci2): |
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Sea_urchin (strPur2): |
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Lancelet (braFlo1): |
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