General information about the entry |
Entry location: | intron |
Position: | chr5:157240839-157241084  |
Length: | 246 nt |
Sequence: | EBF1_Benjamin.fasta |
Overlapping gene: | CLINT1 |
Paralogs: | chr10:130534223-130534382
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Ultraconserved Genomic Regulatory Block (UGRB): |
EBF1_cluster: chr5:157198694-158509587  |
External links: |
CONDOR database: | |
VISTA Enhancer Browser: | |
UCE (Bejerano et al. 2004): | |
Other browsers view: | [Ensembl]
[ECR browser]
[Ancora]
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Conservation in chicken: |
Chicken (galGal3): | Region: chr13:11326535-11326780        Identity: >95%This UCNE has 1 paralogous region in Chicken
Paralog #1:   chr6:35653956-35654115   Identity: 65.64%
   E-value: 0.0000063   Bit-score: 55.5 |
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Conservation in other species: |
Mouse (mm10): | Region #1:   chr11:45886649-45886886   Identity: 96.22%
   E-value: 1.2e-56   Bit-score: 225.3 |
This UCNE has 1 paralogous region in Mouse
Paralog #1:   chr7:136229514-136229704   Identity: 60.62%
   E-value: 0.000098   Bit-score: 52.8 |
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Armadillo (dasNov1): |
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Opossum (monDom5): | Region #1:   chr1:352793374-352793618   Identity: 98.37%
   E-value: 8.8e-60   Bit-score: 236.1 |
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Platypus (ornAna1): | Region #1:   chrX1:24173506-24173753   Identity: 97.58%
   E-value: 3.8e-62   Bit-score: 243.1 |
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Zebra_finch (taeGut1): | Region #1:   chr13:4614292-4614535   Identity: 98.36%
   E-value: 2.8e-60   Bit-score: 236.2 |
This UCNE has 1 paralogous region in Zebra_finch
Paralog #1:   chr6:34570034-34570193   Identity: 65.64%
   E-value: 0.0000053   Bit-score: 55.9 |
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Lizard (anoCar2): | This UCNE has 1 paralogous region in Lizard
Paralog #1:   chr3:54643695-54643854   Identity: 63.98%
   E-value: 0.0000073   Bit-score: 56 |
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Painted_turtle (chrPic1): | Region #1:   JH584705:1268882-1269127   Identity: 97.97%
   E-value: 1.6e-59   Bit-score: 234.8 |
This UCNE has 1 paralogous region in Painted_turtle
Paralog #1:   JH584701:1809208-1809398   Identity: 62.37%
   E-value: 0.0000074   Bit-score: 56.5 |
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Xenopus (xenTro3): | Region #1:   GL173144:579243-579492   Identity: 71.83%
   E-value: 2.7e-21   Bit-score: 107 |
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Fugu (fr2): |
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Medaka (oryLat2): |
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Stickleback (gasAcu1): |
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Tetraodon (tetNig2): |
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Zebrafish (danRer7): |
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Lamprey (petMar1): |
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Ciona_intestinalis (ci2): |
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Sea_urchin (strPur2): |
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Lancelet (braFlo1): |
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