UCNE: TFAP2A_Naomi_2
(id = 28962)

General information about the entry
Entry location:intergenic
Position:chr6:10030411-10030692
Length:282 nt
Sequence:TFAP2A_Naomi_2.fasta
Upstream gene:HULC
Downstream gene:TFAP2A
Paralogs:
Ultraconserved Genomic Regulatory Block (UGRB): TFAP2A_cluster: chr6:8153373-10408287
External links:
CONDOR database:CRCNE00007028;
VISTA Enhancer Browser:
UCE (Bejerano et al. 2004):
Other browsers view:[Ensembl] [ECR browser] [Ancora]
Conservation in chicken:
Chicken (galGal3): Region: chr2:64593152-64593433        Identity: >95%
Conservation in other species:
Mouse (mm10):
Region #1:   chr13:40381999-40382280   Identity: 96.81%    E-value: 3.9e-58   Bit-score: 230.4

Armadillo (dasNov1):
Region #1:   scaffold_6524:68830-69111   Identity: 97.52%    E-value: 2.6e-54   Bit-score: 217.9

Opossum (monDom5):
Region #1:   chr3:332502274-332502555   Identity: 96.45%    E-value: 4.3e-53   Bit-score: 214.1

Platypus (ornAna1):
Region #1:   Ultra474:3018083-3018362   Identity: 95.39%    E-value: 3.2e-57   Bit-score: 226.9

Zebra_finch (taeGut1):
Region #1:   chr2:68105787-68106068   Identity: 95.04%    E-value: 3.1e-54   Bit-score: 216.3

Lizard (anoCar2):
Region #1:   chrUn_GL343209:2083882-2084058   Identity: 82.49%    E-value: 9.5e-22   Bit-score: 108.9

Painted_turtle (chrPic1):
Region #1:   JH584783:1253803-1254055   Identity: 95.26%    E-value: 1.8e-47   Bit-score: 194.9

Xenopus (xenTro3):
Region #1:   GL172669:1277963-1278243   Identity: 85.46%    E-value: 7e-40   Bit-score: 168.9
This UCNE has 1 paralogous region in Xenopus

Fugu (fr2):
Region #1:   chrUn:225249558-225249701   Identity: 83.11%    E-value: 1.4e-22   Bit-score: 106.1

Medaka (oryLat2):
Region #1:   chr20:10931087-10931343   Identity: 70.88%    E-value: 3.6e-21   Bit-score: 101.5

Stickleback (gasAcu1):
Region #1:   chrXXI:4172323-4172617   Identity: 67.89%    E-value: 7.9e-22   Bit-score: 103.8

Tetraodon (tetNig2):
Region #1:   chr6:934516-934771   Identity: 69.62%    E-value: 5.6e-23   Bit-score: 107.4

Zebrafish (danRer7):
Region #1:   Zv9_NA73:4623-4788   Identity: 80%    E-value: 1.7e-17   Bit-score: 90.1

Lamprey (petMar1):
Ciona_intestinalis (ci2):
Sea_urchin (strPur2):
Lancelet (braFlo1):