General information about the entry |
Entry location: | intergenic |
Position: | chr6:51274781-51275052  |
Length: | 272 nt |
Sequence: | chr6_Figaro.fasta |
Upstream gene: | TFAP2B |
Downstream gene: | PKHD1 |
Paralogs: | chr11:102702672-102702938 chr6:160169232-160169503
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External links: |
CONDOR database: | |
VISTA Enhancer Browser: | |
UCE (Bejerano et al. 2004): | |
Other browsers view: | [Ensembl]
[ECR browser]
[Ancora]
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Conservation in chicken: |
Chicken (galGal3): | Region: chr3:47497361-47497634        Identity: >95%
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Conservation in other species: |
Mouse (mm10): | This UCNE has 6 paralogous regions in Mouse
Paralog #1:   chr2:179177708-179177979   Identity: 97.06%
   E-value: 1.5e-69   Bit-score: 268.3 |
Paralog #2:   chr17:12975195-12975466   Identity: 96.69%
   E-value: 5.2e-69   Bit-score: 266.5 |
Paralog #3:   chr8:3841999-3842269   Identity: 94.83%
   E-value: 6.4e-66   Bit-score: 256.2 |
Paralog #4:   chr10:47325121-47325392   Identity: 91.18%
   E-value: 1.2e-60   Bit-score: 238.8 |
Paralog #5:   chrX:60487258-60487520   Identity: 77.26%
   E-value: 2.7e-38   Bit-score: 164.4 |
Paralog #6:   chr10:72752377-72752559   Identity: 63.02%
   E-value: 0.0000044   Bit-score: 57.5 |
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Armadillo (dasNov1): | This UCNE has 6 paralogous regions in Armadillo
Paralog #1:   scaffold_20273:6425-6696   Identity: 98.16%
   E-value: 1.9e-57   Bit-score: 228.2 |
Paralog #2:   scaffold_68917:3102-3377   Identity: 95.65%
   E-value: 1.2e-54   Bit-score: 218.9 |
Paralog #3:   scaffold_57546:4719-4990   Identity: 90.44%
   E-value: 6.8e-48   Bit-score: 196.5 |
Paralog #4:   scaffold_43688:8981-9252   Identity: 87.87%
   E-value: 1e-44   Bit-score: 185.9 |
Paralog #5:   scaffold_76489:4987-5195   Identity: 88.52%
   E-value: 8e-33   Bit-score: 146.4 |
Paralog #6:   scaffold_3992:7510-7679   Identity: 97.06%
   E-value: 1.2e-31   Bit-score: 142.6 |
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Opossum (monDom5): | This UCNE has 3 paralogous regions in Opossum
Paralog #1:   chr2:442126095-442126366   Identity: 95.59%
   E-value: 1.4e-63   Bit-score: 248.9 |
Paralog #2:   chr1:254110769-254110945   Identity: 77.53%
   E-value: 9.8e-20   Bit-score: 103.2 |
Paralog #3:   chr1:497291939-497292123   Identity: 70.27%
   E-value: 0.00000000000037   Bit-score: 81.4 |
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Platypus (ornAna1): | This UCNE has 1 paralogous region in Platypus
Paralog #1:   Ultra61:262274-262551   Identity: 92.81%
   E-value: 6e-63   Bit-score: 245.9 |
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Zebra_finch (taeGut1): | This UCNE has 1 paralogous region in Zebra_finch
Paralog #1:   chr3:57546873-57547146   Identity: 95.26%
   E-value: 7.2e-66   Bit-score: 254.9 |
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Lizard (anoCar2): | This UCNE has 1 paralogous region in Lizard
Paralog #1:   chr1:212226878-212227139   Identity: 91.54%
   E-value: 1e-59   Bit-score: 235 |
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Painted_turtle (chrPic1): | This UCNE has 1 paralogous region in Painted_turtle
Paralog #1:   JH584587:2712001-2712274   Identity: 94.53%
   E-value: 1.7e-63   Bit-score: 248.1 |
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Xenopus (xenTro3): | This UCNE has 1 paralogous region in Xenopus
Paralog #1:   GL172710:191402-191676   Identity: 90.18%
   E-value: 1.1e-56   Bit-score: 224.7 |
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Fugu (fr2): | Region #1:   chrUn:253935444-253935626   Identity: 87.43%
   E-value: 1.1e-38   Bit-score: 159.6 |
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Medaka (oryLat2): | Region #1:   chr24:6876309-6876491   Identity: 87.98%
   E-value: 1.2e-37   Bit-score: 156.2 |
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Stickleback (gasAcu1): | Region #1:   chrXVIII:8726478-8726660   Identity: 88.52%
   E-value: 6e-40   Bit-score: 163.9 |
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Tetraodon (tetNig2): | Region #1:   chr14:3729458-3729640   Identity: 87.98%
   E-value: 3.6e-39   Bit-score: 161.1 |
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Zebrafish (danRer7): | This UCNE has 1 paralogous region in Zebrafish
Paralog #1:   chr20:30960975-30961276   Identity: 75.17%
   E-value: 4.1e-39   Bit-score: 161.9 |
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Lamprey (petMar1): | This UCNE has 1 paralogous region in Lamprey
Paralog #1:   Contig29367:9615-9789   Identity: 74.43%
   E-value: 8.4e-20   Bit-score: 101.5 |
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Ciona_intestinalis (ci2): |
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Sea_urchin (strPur2): |
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Lancelet (braFlo1): |
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