General information about the entry |
Entry location: | intergenic |
Position: | chr6:85158988-85159251  |
Length: | 264 nt |
Sequence: | SYNCRIP_Bryan.fasta |
Upstream gene: | KIAA1009 |
Downstream gene: | TBX18 |
Paralogs: | |
Ultraconserved Genomic Regulatory Block (UGRB): |
SYNCRIP_cluster: chr6:85071180-86324122  |
External links: |
CONDOR database: | |
VISTA Enhancer Browser: | |
UCE (Bejerano et al. 2004): | |
Other browsers view: | [Ensembl]
[ECR browser]
[Ancora]
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Conservation in chicken: |
Chicken (galGal3): | Region: chr3:80110260-80110523        Identity: >95%
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Conservation in other species: |
Mouse (mm10): | Region #1:   chr9:87443842-87444106   Identity: 96.98%
   E-value: 6.7e-63   Bit-score: 246.1 |
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Armadillo (dasNov1): | Region #1:   scaffold_8755:4513-4776   Identity: 98.48%
   E-value: 1e-61   Bit-score: 242.4 |
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Opossum (monDom5): | Region #1:   chr2:340432799-340433062   Identity: 98.11%
   E-value: 1.2e-60   Bit-score: 239.1 |
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Platypus (ornAna1): | Region #1:   Ultra483:5170775-5171038   Identity: 95.83%
   E-value: 1.3e-58   Bit-score: 231.4 |
This UCNE has 1 paralogous region in Platypus
Paralog #1:   Contig252282:484-747   Identity: 94.7%
   E-value: 3.7e-57   Bit-score: 226.6 |
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Zebra_finch (taeGut1): | Region #1:   chr3:79686391-79686651   Identity: 95.4%
   E-value: 2.2e-58   Bit-score: 230 |
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Lizard (anoCar2): | Region #1:   chr1:197050574-197050820   Identity: 87.5%
   E-value: 3.4e-45   Bit-score: 186.7 |
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Painted_turtle (chrPic1): | Region #1:   JH584952:561295-561558   Identity: 93.56%
   E-value: 7e-56   Bit-score: 222.8 |
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Xenopus (xenTro3): | Region #1:   GL172712:299257-299510   Identity: 92.13%
   E-value: 5.9e-49   Bit-score: 199 |
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Fugu (fr2): |
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Medaka (oryLat2): |
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Stickleback (gasAcu1): |
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Tetraodon (tetNig2): |
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Zebrafish (danRer7): | Region #1:   chr23:31442422-31442593   Identity: 67.23%
   E-value: 0.000000004   Bit-score: 62.2 |
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Lamprey (petMar1): |
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Ciona_intestinalis (ci2): |
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Sea_urchin (strPur2): |
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Lancelet (braFlo1): |
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