General information about the entry |
Entry location: | intergenic |
Position: | chr6:137834093-137834320  |
Length: | 228 nt |
Sequence: | TNFAIP3_Poseidon.fasta |
Upstream gene: | OLIG3 |
Downstream gene: | TNFAIP3 |
Paralogs: | chr21:34364037-34364153
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Ultraconserved Genomic Regulatory Block (UGRB): |
TNFAIP3_cluster: chr6:137641495-137936094  |
External links: |
CONDOR database: | |
VISTA Enhancer Browser: | |
UCE (Bejerano et al. 2004): | |
Other browsers view: | [Ensembl]
[ECR browser]
[Ancora]
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Conservation in chicken: |
Chicken (galGal3): | Region: chr3:56624262-56624489        Identity: >95%This UCNE has 1 paralogous region in Chicken
Paralog #1:   chr1:108637223-108637373   Identity: 67.52%
   E-value: 0.00001   Bit-score: 54.7 |
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Conservation in other species: |
Mouse (mm10): | Region #1:   chr10:19339111-19339337   Identity: 93.86%
   E-value: 2.8e-51   Bit-score: 207.3 |
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Armadillo (dasNov1): | Region #1:   scaffold_23110:43154-43381   Identity: 92.98%
   E-value: 2.8e-48   Bit-score: 197.5 |
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Opossum (monDom5): | Region #1:   chr2:413398794-413399019   Identity: 93.36%
   E-value: 1e-47   Bit-score: 196 |
This UCNE has 1 paralogous region in Opossum
Paralog #1:   chr4:14971929-14972117   Identity: 64.82%
   E-value: 0.000063   Bit-score: 53.8 |
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Platypus (ornAna1): | Region #1:   chr2:21681828-21682055   Identity: 92.54%
   E-value: 1.7e-49   Bit-score: 201 |
This UCNE has 2 paralogous regions in Platypus
Paralog #1:   Contig286794:678-842   Identity: 66.08%
   E-value: 0.000023   Bit-score: 54.3 |
Paralog #2:   Ultra41:1659316-1659480   Identity: 66.08%
   E-value: 0.000027   Bit-score: 54.1 |
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Zebra_finch (taeGut1): | Region #1:   chr3:50500315-50500542   Identity: 95.18%
   E-value: 3.6e-53   Bit-score: 212.5 |
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Lizard (anoCar2): |
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Painted_turtle (chrPic1): | Region #1:   JH584429:16164897-16165124   Identity: 93.86%
   E-value: 1.7e-49   Bit-score: 201.3 |
This UCNE has 1 paralogous region in Painted_turtle
Paralog #1:   JH584474:2365336-2365528   Identity: 62.94%
   E-value: 0.000025   Bit-score: 54.6 |
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Xenopus (xenTro3): |
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Fugu (fr2): | Region #1:   chrUn:357419414-357419575   Identity: 81.82%
   E-value: 5.4e-26   Bit-score: 117.1 |
Region #2:   chrUn:248660411-248660572   Identity: 81.21%
   E-value: 2.2e-25   Bit-score: 115.1 |
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Medaka (oryLat2): | Region #1:   chr15:16271165-16271391   Identity: 80%
   E-value: 2e-36   Bit-score: 151.9 |
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Stickleback (gasAcu1): | Region #1:   chrVI:12993865-12994091   Identity: 79.48%
   E-value: 2.8e-36   Bit-score: 151.5 |
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Tetraodon (tetNig2): | Region #1:   chr17:11410363-11410512   Identity: 80.79%
   E-value: 1.2e-22   Bit-score: 106 |
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Zebrafish (danRer7): | Region #1:   chr13:1185052-1185274   Identity: 86.61%
   E-value: 3.1e-45   Bit-score: 182 |
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Lamprey (petMar1): |
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Ciona_intestinalis (ci2): |
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Sea_urchin (strPur2): |
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Lancelet (braFlo1): |
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