UCNE: HOXA_Vera
(id = 31058)

General information about the entry
Entry location:UTR
Position:chr7:26231439-26232007
Length:569 nt
Sequence:HOXA_Vera.fasta
Overlapping gene:HNRNPA2B1
Paralogs:chr13:107041614-107042084
chr21:42750374-42750610
Ultraconserved Genomic Regulatory Block (UGRB): HOXA_cluster: chr7:26231439-27646322
External links:
CONDOR database:
VISTA Enhancer Browser:
UCE (Bejerano et al. 2004):
Other browsers view:[Ensembl] [ECR browser] [Ancora]
Conservation in chicken:
Chicken (galGal3): Region: chr2:32117269-32117826        Identity: >95%
Conservation in other species:
Mouse (mm10):
Region #1:   chr6:51462736-51463303   Identity: 98.77%    E-value: 1.2e-96   Bit-score: 359.3
This UCNE has 12 paralogous regions in Mouse

Armadillo (dasNov1):
Region #1:   scaffold_14736:7805-8381   Identity: 97.41%    E-value: 1.5e-83   Bit-score: 316
Region #2:   scaffold_42863:9451-9958   Identity: 90.22%    E-value: 1.1e-60   Bit-score: 240
Region #3:   scaffold_102:136562-137020   Identity: 85.65%    E-value: 3.5e-47   Bit-score: 195.2
Region #4:   scaffold_99280:2123-2467   Identity: 84.77%    E-value: 2.2e-32   Bit-score: 146
Region #5:   scaffold_114863:38512-38687   Identity: 91.06%    E-value: 7.8e-16   Bit-score: 91.1
This UCNE has 1 paralogous region in Armadillo

Opossum (monDom5):
Region #1:   chr8:298228740-298229325   Identity: 96.43%    E-value: 5.9e-79   Bit-score: 301
This UCNE has 8 paralogous regions in Opossum

Platypus (ornAna1):
Region #1:   Ultra231:1381888-1382451   Identity: 97.02%    E-value: 6e-105   Bit-score: 386.5

Zebra_finch (taeGut1):
Region #1:   chr2:52095939-52096497   Identity: 95.46%    E-value: 5.2e-87   Bit-score: 326.2

Lizard (anoCar2):
Region #1:   chr6:31852949-31853503   Identity: 94.04%    E-value: 8.1e-95   Bit-score: 352.7

Painted_turtle (chrPic1):
Region #1:   JH584577:4155181-4155735   Identity: 96.14%    E-value: 5.2e-88   Bit-score: 330.6

Xenopus (xenTro3):
Region #1:   GL172692:1957071-1957433   Identity: 84.7%    E-value: 7.9e-39   Bit-score: 166.4

Fugu (fr2):
Medaka (oryLat2):
Stickleback (gasAcu1):
Tetraodon (tetNig2):
Zebrafish (danRer7):
Lamprey (petMar1):
Ciona_intestinalis (ci2):
Sea_urchin (strPur2):
Lancelet (braFlo1):