UCNE: HOXA_Ophelia
(id = 31088)

General information about the entry
Entry location:intergenic
Position:chr7:26689249-26689531
Length:283 nt
Sequence:HOXA_Ophelia.fasta
Upstream gene:C7orf71
Downstream gene:SKAP2
Paralogs:
Ultraconserved Genomic Regulatory Block (UGRB): HOXA_cluster: chr7:26231439-27646322
External links:
CONDOR database:
VISTA Enhancer Browser:
UCE (Bejerano et al. 2004):
Other browsers view:[Ensembl] [ECR browser] [Ancora]
Conservation in chicken:
Chicken (galGal3): Region: chr2:32307923-32308205        Identity: >95%
Conservation in other species:
Mouse (mm10):
Region #1:   chr6:51840320-51840601   Identity: 97.88%    E-value: 1.4e-56   Bit-score: 225.3

Armadillo (dasNov1):
Region #1:   scaffold_4990:94869-95151   Identity: 97.88%    E-value: 7.5e-53   Bit-score: 213

Opossum (monDom5):
Region #1:   chr8:297790867-297791149   Identity: 95.05%    E-value: 1.4e-49   Bit-score: 202.5

Platypus (ornAna1):
Region #1:   Ultra231:1822997-1823279   Identity: 97.53%    E-value: 2.5e-57   Bit-score: 227.3
This UCNE has 1 paralogous region in Platypus

Zebra_finch (taeGut1):
Region #1:   chr2:52329612-52329894   Identity: 96.11%    E-value: 9e-54   Bit-score: 214.8

Lizard (anoCar2):
Region #1:   chr6:32144648-32144929   Identity: 96.45%    E-value: 6.3e-59   Bit-score: 232.5

Painted_turtle (chrPic1):
Region #1:   JH584682:276656-276938   Identity: 96.47%    E-value: 6.5e-54   Bit-score: 216.3

Xenopus (xenTro3):
Region #1:   GL172692:1765362-1765643   Identity: 96.45%    E-value: 5.8e-55   Bit-score: 219

Fugu (fr2):
Medaka (oryLat2):
Stickleback (gasAcu1):
Tetraodon (tetNig2):
Zebrafish (danRer7):
Lamprey (petMar1):
Ciona_intestinalis (ci2):
Sea_urchin (strPur2):
Lancelet (braFlo1):