UCNE: HOXA_Midori
(id = 31098)

General information about the entry
Entry location:intron
Position:chr7:26729202-26729762
Length:561 nt
Sequence:HOXA_Midori.fasta
Overlapping gene:SKAP2
Paralogs:
Ultraconserved Genomic Regulatory Block (UGRB): HOXA_cluster: chr7:26231439-27646322
External links:
CONDOR database:
VISTA Enhancer Browser:hs296;
UCE (Bejerano et al. 2004):uc.211 http://users.soe.ucsc.edu/~jill/ultra.html
Other browsers view:[Ensembl] [ECR browser] [Ancora]
Conservation in chicken:
Chicken (galGal3): Region: chr2:32341995-32342555        Identity: >95%
Conservation in other species:
Mouse (mm10):
Region #1:   chr6:51879093-51879652   Identity: 98.75%    E-value: 8.9e-124   Bit-score: 449.5

Armadillo (dasNov1):
Region #1:   scaffold_25297:13759-13925   Identity: 97.6%    E-value: 1.4e-25   Bit-score: 123.5

Opossum (monDom5):
Region #1:   chr8:297747992-297748524   Identity: 91.6%    E-value: 1.7e-91   Bit-score: 342.7

Platypus (ornAna1):
Region #1:   Ultra231:1874520-1875078   Identity: 97.14%    E-value: 2.3e-122   Bit-score: 444.3

Zebra_finch (taeGut1):
Region #1:   chr2:52365887-52366447   Identity: 96.79%    E-value: 1.9e-115   Bit-score: 420.7

Lizard (anoCar2):
Region #1:   chrUn_GL343275:1767785-1768327   Identity: 94.11%    E-value: 2.1e-113   Bit-score: 414.4

Painted_turtle (chrPic1):
Region #1:   JH584682:317732-318292   Identity: 98.04%    E-value: 3.6e-119   Bit-score: 434.1

Xenopus (xenTro3):
Region #1:   GL172692:1693993-1694504   Identity: 92.38%    E-value: 2.4e-91   Bit-score: 340.9

Fugu (fr2):
Region #1:   chrUn:43365089-43365523   Identity: 72.02%    E-value: 3.9e-52   Bit-score: 205.3

Medaka (oryLat2):
Region #1:   chr11:10430868-10431315   Identity: 69.2%    E-value: 1.9e-44   Bit-score: 179.9

Stickleback (gasAcu1):
Region #1:   chrX:9824711-9825136   Identity: 70.18%    E-value: 5.8e-44   Bit-score: 178.3

Tetraodon (tetNig2):
Region #1:   chr21:3094035-3094469   Identity: 71.79%    E-value: 2.1e-52   Bit-score: 206.1

Zebrafish (danRer7):
Region #1:   chr19:19320227-19320701   Identity: 68.66%    E-value: 2.4e-39   Bit-score: 163.7

Lamprey (petMar1):
Ciona_intestinalis (ci2):
Sea_urchin (strPur2):
Lancelet (braFlo1):