General information about the entry |
Entry location: | intron |
Position: | chr7:69636442-69636880  |
Length: | 439 nt |
Sequence: | AUTS2_Chao.fasta |
Overlapping gene: | AUTS2 |
Paralogs: | |
Ultraconserved Genomic Regulatory Block (UGRB): |
AUTS2_cluster: chr7:69111243-70170090  |
External links: |
CONDOR database: | CRCNE00008948; CRCNE00008932; |
VISTA Enhancer Browser: | |
UCE (Bejerano et al. 2004): | |
Other browsers view: | [Ensembl]
[ECR browser]
[Ancora]
|
Conservation in chicken: |
Chicken (galGal3): | Region: chr19:1664241-1664680        Identity: >95%
|
Conservation in other species: |
Mouse (mm10): | Region #1:   chr5:131999094-131999531   Identity: 98.18%
   E-value: 5e-98   Bit-score: 363.6 |
|
Armadillo (dasNov1): |
|
Opossum (monDom5): | Region #1:   chr2:511214645-511215083   Identity: 97.95%
   E-value: 4.4e-90   Bit-score: 337.6 |
|
Platypus (ornAna1): | Region #1:   Contig23458:7475-7879   Identity: 93.1%
   E-value: 6e-76   Bit-score: 289.8 |
This UCNE has 1 paralogous region in Platypus
Paralog #1:   Contig101831:2-132   Identity: 79.39%
   E-value: 0.00000000096   Bit-score: 69.8 |
|
|
Zebra_finch (taeGut1): | Region #1:   chr19:1901806-1902241   Identity: 95.88%
   E-value: 7.2e-88   Bit-score: 328.7 |
|
Lizard (anoCar2): | Region #1:   chrUn_GL343720:184559-184992   Identity: 84.79%
   E-value: 1.9e-67   Bit-score: 261.4 |
|
Painted_turtle (chrPic1): | Region #1:   JH584468:2695685-2696124   Identity: 97.05%
   E-value: 2.5e-91   Bit-score: 341.3 |
|
Xenopus (xenTro3): | Region #1:   GL172807:1845277-1845715   Identity: 95.24%
   E-value: 9e-87   Bit-score: 325.3 |
|
Fugu (fr2): | Region #1:   chrUn:309471999-309472300   Identity: 66.56%
   E-value: 4.5e-23   Bit-score: 108.4 |
|
Medaka (oryLat2): | Region #1:   chr14:23085026-23085337   Identity: 64.97%
   E-value: 8.9e-21   Bit-score: 100.8 |
|
Stickleback (gasAcu1): | Region #1:   chrVII:13759608-13759929   Identity: 76.99%
   E-value: 4.3e-42   Bit-score: 171.7 |
|
Tetraodon (tetNig2): | Region #1:   chr7:694033-694281   Identity: 74.8%
   E-value: 6.2e-28   Bit-score: 124.5 |
|
Zebrafish (danRer7): | Region #1:   chr10:28122538-28122873   Identity: 76.33%
   E-value: 1.1e-36   Bit-score: 154.6 |
|
Lamprey (petMar1): |
|
Ciona_intestinalis (ci2): |
|
Sea_urchin (strPur2): |
|
Lancelet (braFlo1): |
|