General information about the entry |
Entry location: | intron |
Position: | chr7:139059066-139059282  |
Length: | 217 nt |
Sequence: | chr7_Logan.fasta |
Overlapping gene: | LUC7L2 |
Paralogs: | chr16:278296-278452
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External links: |
CONDOR database: | |
VISTA Enhancer Browser: | |
UCE (Bejerano et al. 2004): | |
Other browsers view: | [Ensembl]
[ECR browser]
[Ancora]
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Conservation in chicken: |
Chicken (galGal3): | Region: chr1:51010108-51010327        Identity: >95%
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Conservation in other species: |
Mouse (mm10): | Region #1:   chr6:38568767-38568983   Identity: 96.31%
   E-value: 6e-55   Bit-score: 219.4 |
This UCNE has 2 paralogous regions in Mouse
Paralog #1:   chr17:26253898-26254081   Identity: 75.54%
   E-value: 7.3e-20   Bit-score: 102.9 |
Paralog #2:   chr4:23518401-23518521   Identity: 77.69%
   E-value: 0.0000000000024   Bit-score: 77.9 |
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Armadillo (dasNov1): | Region #1:   scaffold_17856:14526-14733   Identity: 96.15%
   E-value: 5.4e-46   Bit-score: 189.9 |
This UCNE has 1 paralogous region in Armadillo
Paralog #1:   scaffold_21780:45694-45877   Identity: 75.54%
   E-value: 2.8e-17   Bit-score: 94.5 |
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Opossum (monDom5): | Region #1:   chr8:201504495-201504714   Identity: 94.12%
   E-value: 2.3e-50   Bit-score: 204.6 |
This UCNE has 1 paralogous region in Opossum
Paralog #1:   chr6:149498515-149498699   Identity: 75.68%
   E-value: 1.1e-18   Bit-score: 99.4 |
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Platypus (ornAna1): | Region #1:   Ultra380:4035447-4035666   Identity: 93.18%
   E-value: 2e-50   Bit-score: 203.9 |
This UCNE has 1 paralogous region in Platypus
Paralog #1:   Contig22360:7137-7348   Identity: 72.22%
   E-value: 4.4e-19   Bit-score: 99.8 |
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Zebra_finch (taeGut1): | Region #1:   chr1A:48489442-48489661   Identity: 93.18%
   E-value: 5.9e-49   Bit-score: 198.4 |
This UCNE has 1 paralogous region in Zebra_finch
Paralog #1:   chr14:2806831-2807032   Identity: 73.66%
   E-value: 3.5e-20   Bit-score: 102.9 |
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Lizard (anoCar2): | Region #1:   chrUn_GL343614:244607-244822   Identity: 91.28%
   E-value: 5.8e-46   Bit-score: 189 |
This UCNE has 1 paralogous region in Lizard
Paralog #1:   chrUn_GL343518:497278-497467   Identity: 75.13%
   E-value: 6.5e-19   Bit-score: 99.1 |
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Painted_turtle (chrPic1): | Region #1:   JH584608:903444-903655   Identity: 94.81%
   E-value: 1.7e-49   Bit-score: 201.2 |
This UCNE has 1 paralogous region in Painted_turtle
Paralog #1:   JH584636:1530991-1531175   Identity: 75.68%
   E-value: 1.4e-18   Bit-score: 98.6 |
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Xenopus (xenTro3): | Region #1:   GL172745:692770-692990   Identity: 87.39%
   E-value: 9.7e-39   Bit-score: 164.8 |
This UCNE has 1 paralogous region in Xenopus
Paralog #1:   GL173102:48491-48633   Identity: 75.66%
   E-value: 0.0000000000023   Bit-score: 77.1 |
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Fugu (fr2): | This UCNE has 1 paralogous region in Fugu
Paralog #1:   chrUn:13399510-13399679   Identity: 75.88%
   E-value: 5.5e-22   Bit-score: 103.7 |
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Medaka (oryLat2): | This UCNE has 1 paralogous region in Medaka
Paralog #1:   chr19:8458990-8459171   Identity: 71.43%
   E-value: 2.7e-18   Bit-score: 91.6 |
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Stickleback (gasAcu1): | This UCNE has 1 paralogous region in Stickleback
Paralog #1:   chrV:10675480-10675674   Identity: 71.86%
   E-value: 1.2e-20   Bit-score: 99.5 |
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Tetraodon (tetNig2): | This UCNE has 1 paralogous region in Tetraodon
Paralog #1:   chr2:6899619-6899788   Identity: 75.29%
   E-value: 1.8e-21   Bit-score: 102 |
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Zebrafish (danRer7): | This UCNE has 1 paralogous region in Zebrafish
Paralog #1:   chr24:41214029-41214226   Identity: 70.19%
   E-value: 0.0000000000000012   Bit-score: 83.6 |
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Lamprey (petMar1): | Region #1:   Contig2046:25602-25786   Identity: 75%
   E-value: 9.5e-18   Bit-score: 94.4 |
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Ciona_intestinalis (ci2): |
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Sea_urchin (strPur2): |
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Lancelet (braFlo1): |
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