General information about the entry |
Entry location: | intron |
Position: | chr8:25775827-25776216  |
Length: | 390 nt |
Sequence: | EBF2_Scarlett.fasta |
Overlapping gene: | EBF2 |
Paralogs: | chr10:131691517-131691860: EBF3_Scarlett; chr5:158341780-158342037: EBF1_Scarlett;
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Ultraconserved Genomic Regulatory Block (UGRB): |
EBF2_cluster: chr8:25751964-26228326  |
External links: |
CONDOR database: | |
VISTA Enhancer Browser: | hs231; |
UCE (Bejerano et al. 2004): | uc.235 http://users.soe.ucsc.edu/~jill/ultra.html |
Other browsers view: | [Ensembl]
[ECR browser]
[Ancora]
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Conservation in chicken: |
Chicken (galGal3): | Region: chr22:693428-693817        Identity: >95%This UCNE has 2 paralogous regions in Chicken
Paralog #1:   chr6:36217680-36218028   Identity: 64.02%
   E-value: 0.00000000001   Bit-score: 75.4 |
Paralog #2:   chr13:10863176-10863478   Identity: 63.96%
   E-value: 0.000000015   Bit-score: 64.9 |
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Conservation in other species: |
Mouse (mm10): | Region #1:   chr14:67361522-67361911   Identity: 98.72%
   E-value: 1.2e-65   Bit-score: 255.8 |
This UCNE has 2 paralogous regions in Mouse
Paralog #1:   chr7:137250486-137250834   Identity: 62.5%
   E-value: 0.00000000023   Bit-score: 72.2 |
Paralog #2:   chr11:44800304-44800601   Identity: 64.03%
   E-value: 0.00000017   Bit-score: 62.6 |
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Armadillo (dasNov1): | Region #1:   scaffold_1456:81121-81511   Identity: 98.98%
   E-value: 1.6e-60   Bit-score: 238.9 |
This UCNE has 2 paralogous regions in Armadillo
Paralog #1:   scaffold_46441:761-1110   Identity: 63.87%
   E-value: 0.0000000026   Bit-score: 68.9 |
Paralog #2:   scaffold_47:193555-193868   Identity: 63.66%
   E-value: 0.00000024   Bit-score: 62.3 |
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Opossum (monDom5): | Region #1:   chr1:736574447-736574820   Identity: 94.65%
   E-value: 1e-51   Bit-score: 210 |
This UCNE has 2 paralogous regions in Opossum
Paralog #1:   chrUn:25041425-25041773   Identity: 64.02%
   E-value: 0.00000000089   Bit-score: 70.7 |
Paralog #2:   chr1:354206656-354206969   Identity: 63.66%
   E-value: 0.00000053   Bit-score: 61.4 |
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Platypus (ornAna1): | Region #1:   chr1:41052092-41052482   Identity: 99.23%
   E-value: 7.4e-73   Bit-score: 279.3 |
This UCNE has 2 paralogous regions in Platypus
Paralog #1:   Ultra350:134691-135039   Identity: 64.02%
   E-value: 0.00000000000031   Bit-score: 81.2 |
Paralog #2:   chrX1:23424472-23424774   Identity: 63.96%
   E-value: 0.00000000087   Bit-score: 69.8 |
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Zebra_finch (taeGut1): | Region #1:   chr22:1592565-1592951   Identity: 97.93%
   E-value: 9.8e-65   Bit-score: 251.7 |
This UCNE has 2 paralogous regions in Zebra_finch
Paralog #1:   chr6:35220032-35220380   Identity: 64.02%
   E-value: 0.0000000000091   Bit-score: 75.7 |
Paralog #2:   chr13:4148976-4149278   Identity: 63.96%
   E-value: 0.000000014   Bit-score: 65.2 |
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Lizard (anoCar2): | Region #1:   chrUn_GL343422:740457-740860   Identity: 91.58%
   E-value: 7.8e-68   Bit-score: 262.5 |
This UCNE has 3 paralogous regions in Lizard
Paralog #1:   chr3:55832169-55832517   Identity: 64.02%
   E-value: 0.00000000000002   Bit-score: 85.1 |
Paralog #2:   chrUn_GL343205:3872496-3872798   Identity: 63.52%
   E-value: 0.00000000014   Bit-score: 72.3 |
Paralog #3:   chrUn_GL344110:22563-22748   Identity: 65.97%
   E-value: 0.000059   Bit-score: 53.6 |
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Painted_turtle (chrPic1): | Region #1:   JH584489:4048580-4048964   Identity: 98.18%
   E-value: 5.4e-65   Bit-score: 253.6 |
This UCNE has 3 paralogous regions in Painted_turtle
Paralog #1:   JH584701:2812278-2812626   Identity: 64.02%
   E-value: 0.0000000000099   Bit-score: 76.7 |
Paralog #2:   JH584705:575251-575553   Identity: 63.96%
   E-value: 0.000000016   Bit-score: 66 |
Paralog #3:   JH584390:384242-384488   Identity: 63.42%
   E-value: 0.000057   Bit-score: 54.2 |
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Xenopus (xenTro3): | Region #1:   GL172666:3870228-3870566   Identity: 87.06%
   E-value: 1.9e-41   Bit-score: 174.6 |
This UCNE has 2 paralogous regions in Xenopus
Paralog #1:   GL172668:1369450-1369763   Identity: 64.58%
   E-value: 0.00000000025   Bit-score: 71.2 |
Paralog #2:   GL172834:568851-569173   Identity: 62.35%
   E-value: 0.0000076   Bit-score: 56.3 |
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Fugu (fr2): | Region #1:   chrUn:112649092-112649294   Identity: 69.27%
   E-value: 0.000000000000036   Bit-score: 78.6 |
This UCNE has 3 paralogous regions in Fugu
Paralog #1:   chrUn:147734561-147734904   Identity: 64.2%
   E-value: 2e-19   Bit-score: 96 |
Paralog #2:   chrUn:170287990-170288230   Identity: 63.93%
   E-value: 0.0000000000016   Bit-score: 73.2 |
Paralog #3:   chrUn:142442377-142442577   Identity: 65.67%
   E-value: 0.000000000086   Bit-score: 67.4 |
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Medaka (oryLat2): | Region #1:   chr9:11864031-11864205   Identity: 72.57%
   E-value: 0.0000000000013   Bit-score: 73.6 |
This UCNE has 4 paralogous regions in Medaka
Paralog #1:   chr15:18873905-18874259   Identity: 63.31%
   E-value: 5.3e-17   Bit-score: 88.1 |
Paralog #2:   chr10:16881620-16881810   Identity: 67.02%
   E-value: 0.00000000017   Bit-score: 66.5 |
Paralog #3:   scaffold1067:50618-50898   Identity: 62.89%
   E-value: 0.000000012   Bit-score: 60.4 |
Paralog #4:   ultracontig182:360953-361130   Identity: 65.73%
   E-value: 0.00000054   Bit-score: 54.9 |
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Stickleback (gasAcu1): | Region #1:   chrXIII:8477849-8478050   Identity: 68.81%
   E-value: 0.00000000000071   Bit-score: 74.5 |
This UCNE has 3 paralogous regions in Stickleback
Paralog #1:   chrVI:11279595-11279928   Identity: 63.99%
   E-value: 2.1e-17   Bit-score: 89.6 |
Paralog #2:   chrIV:14121717-14121907   Identity: 65.97%
   E-value: 0.00000000024   Bit-score: 66.1 |
Paralog #3:   chrVII:18856345-18856495   Identity: 68.21%
   E-value: 0.000000015   Bit-score: 60.1 |
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Tetraodon (tetNig2): | Region #1:   chr12:6820065-6820268   Identity: 68.93%
   E-value: 0.00000000000052   Bit-score: 74.8 |
This UCNE has 3 paralogous regions in Tetraodon
Paralog #1:   chr17:7235482-7235815   Identity: 64.62%
   E-value: 9.3e-19   Bit-score: 93.9 |
Paralog #2:   chr1:3012794-3013076   Identity: 62.24%
   E-value: 0.0000000000014   Bit-score: 73.3 |
Paralog #3:   chr7:8130233-8130433   Identity: 65.02%
   E-value: 0.0000000018   Bit-score: 63 |
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Zebrafish (danRer7): | This UCNE has 4 paralogous regions in Zebrafish
Paralog #1:   chr12:44222484-44222821   Identity: 63.66%
   E-value: 0.00000000028   Bit-score: 66.6 |
Paralog #2:   chr21:32849428-32849704   Identity: 63.35%
   E-value: 0.000000037   Bit-score: 59.6 |
Paralog #3:   chr14:36287499-36287775   Identity: 62.63%
   E-value: 0.00000051   Bit-score: 55.8 |
Paralog #4:   chr14:52950122-52950404   Identity: 63.57%
   E-value: 0.0000071   Bit-score: 52 |
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Lamprey (petMar1): |
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Ciona_intestinalis (ci2): |
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Sea_urchin (strPur2): |
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Lancelet (braFlo1): |
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