General information about the entry |
Entry location: | UTR |
Position: | chr8:53166866-53167543  |
Length: | 678 nt |
Sequence: | ST18_Pablo.fasta |
Overlapping gene: | ST18 |
Paralogs: | |
Ultraconserved Genomic Regulatory Block (UGRB): |
ST18_cluster: chr8:53086455-53207947  |
External links: |
CONDOR database: | |
VISTA Enhancer Browser: | hs698; |
UCE (Bejerano et al. 2004): | uc.238 http://users.soe.ucsc.edu/~jill/ultra.html |
Other browsers view: | [Ensembl]
[ECR browser]
[Ancora]
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Conservation in chicken: |
Chicken (galGal3): | Region: chr2:113160958-113161635        Identity: >95%This UCNE has 1 paralogous region in Chicken
Paralog #1:   chr20:9163777-9164039   Identity: 62.5%
   E-value: 0.00000064   Bit-score: 60.3 |
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Conservation in other species: |
Mouse (mm10): | Region #1:   chr1:6729512-6730186   Identity: 97.2%
   E-value: 1.1e-178   Bit-score: 632.2 |
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Armadillo (dasNov1): | Region #1:   scaffold_7395:70343-71020   Identity: 98.38%
   E-value: 3.3e-173   Bit-score: 614.1 |
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Opossum (monDom5): | Region #1:   chr3:188646649-188647326   Identity: 99.41%
   E-value: 7.2e-185   Bit-score: 653.1 |
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Platypus (ornAna1): | Region #1:   chr7:8359190-8359866   Identity: 99.56%
   E-value: 6.7e-185   Bit-score: 652.3 |
This UCNE has 1 paralogous region in Platypus
Paralog #1:   Ultra337:2117787-2118023   Identity: 62.45%
   E-value: 0.000003   Bit-score: 58.9 |
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Zebra_finch (taeGut1): | Region #1:   chr2:115675766-115676442   Identity: 98.52%
   E-value: 1.7e-180   Bit-score: 637 |
This UCNE has 1 paralogous region in Zebra_finch
Paralog #1:   chr20:9217525-9217787   Identity: 62.86%
   E-value: 0.0000003   Bit-score: 61.5 |
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Lizard (anoCar2): | Region #1:   chrUn_GL343244:1933735-1934412   Identity: 98.82%
   E-value: 4.5e-183   Bit-score: 646.1 |
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Painted_turtle (chrPic1): | Region #1:   JH584900:1558446-1558701   Identity: 62.87%
   E-value: 0.00000051   Bit-score: 61.8 |
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Xenopus (xenTro3): | Region #1:   GL172719:1207783-1208468   Identity: 94.91%
   E-value: 2.2e-165   Bit-score: 587.1 |
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Fugu (fr2): | Region #1:   chrUn:180019987-180020516   Identity: 66.29%
   E-value: 3.8e-50   Bit-score: 198.9 |
Region #2:   chrUn:180020996-180021144   Identity: 82.55%
   E-value: 4.7e-24   Bit-score: 112.2 |
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Medaka (oryLat2): | Region #1:   chr17:28330343-28330537   Identity: 79.6%
   E-value: 2.5e-30   Bit-score: 133.2 |
Region #2:   chr17:28329910-28330059   Identity: 84.11%
   E-value: 8.2e-25   Bit-score: 114.9 |
Region #3:   chr17:28330625-28330792   Identity: 70.39%
   E-value: 0.000000000000015   Bit-score: 80.8 |
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Stickleback (gasAcu1): | Region #1:   chrIII:16506214-16506361   Identity: 83.89%
   E-value: 3.3e-24   Bit-score: 112.9 |
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Tetraodon (tetNig2): | Region #1:   chr15_random:797667-798193   Identity: 66.92%
   E-value: 1e-51   Bit-score: 204.2 |
Region #2:   chr15_random:797195-797349   Identity: 82.58%
   E-value: 1.4e-25   Bit-score: 117.3 |
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Zebrafish (danRer7): | Region #1:   chr24:36554360-36554508   Identity: 79.87%
   E-value: 8.3e-21   Bit-score: 102.4 |
Region #2:   chr24:36554834-36554972   Identity: 81.43%
   E-value: 1.1e-18   Bit-score: 95.3 |
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Lamprey (petMar1): |
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Ciona_intestinalis (ci2): |
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Sea_urchin (strPur2): |
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Lancelet (braFlo1): |
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