General information about the entry |
Entry location: | intergenic |
Position: | chr8:92968735-92968993  |
Length: | 259 nt |
Sequence: | RUNX1T1_Ariel.fasta |
Upstream gene: | SLC26A7 |
Downstream gene: | RUNX1T1 |
Paralogs: | chr2:165008315-165008529
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Ultraconserved Genomic Regulatory Block (UGRB): |
RUNX1T1_cluster: chr8:92825131-94593284  |
External links: |
CONDOR database: | |
VISTA Enhancer Browser: | |
UCE (Bejerano et al. 2004): | |
Other browsers view: | [Ensembl]
[ECR browser]
[Ancora]
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Conservation in chicken: |
Chicken (galGal3): | Region: chr2:129790674-129790936        Identity: >95%
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Conservation in other species: |
Mouse (mm10): | Region #1:   chr4:13893377-13893643   Identity: 92.51%
   E-value: 1.9e-45   Bit-score: 188.2 |
This UCNE has 1 paralogous region in Mouse
Paralog #1:   chr2:64563348-64563520   Identity: 70.52%
   E-value: 0.000000021   Bit-score: 65.1 |
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Armadillo (dasNov1): | Region #1:   scaffold_4721:11588-11787   Identity: 77.67%
   E-value: 0.0000000000000019   Bit-score: 88.7 |
Region #2:   scaffold_133358:3364-3499   Identity: 81.94%
   E-value: 0.000000002   Bit-score: 68.7 |
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Opossum (monDom5): | Region #1:   chr3:354760118-354760377   Identity: 96.15%
   E-value: 8.1e-42   Bit-score: 176.5 |
This UCNE has 4 paralogous regions in Opossum
Paralog #1:   chr3:527918010-527918190   Identity: 87.91%
   E-value: 5.6e-20   Bit-score: 104 |
Paralog #2:   chr3:18590506-18590787   Identity: 72.54%
   E-value: 3.9e-18   Bit-score: 97.9 |
Paralog #3:   chr2:311030041-311030186   Identity: 89.61%
   E-value: 9.8e-17   Bit-score: 93.2 |
Paralog #4:   chr6:39308860-39309046   Identity: 63.6%
   E-value: 0.000061   Bit-score: 54 |
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Platypus (ornAna1): | Region #1:   Ultra48:488692-488950   Identity: 96.14%
   E-value: 2.1e-51   Bit-score: 207.5 |
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Zebra_finch (taeGut1): | Region #1:   chr2:131390022-131390286   Identity: 94.34%
   E-value: 1.6e-46   Bit-score: 190.6 |
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Lizard (anoCar2): | Region #1:   chr4:17706610-17706873   Identity: 93.56%
   E-value: 5.7e-48   Bit-score: 195.9 |
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Painted_turtle (chrPic1): |
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Xenopus (xenTro3): | Region #1:   GL176428:678-924   Identity: 93.57%
   E-value: 1.8e-43   Bit-score: 180.8 |
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Fugu (fr2): | Region #1:   chrUn:302127739-302128030   Identity: 66.11%
   E-value: 2.4e-20   Bit-score: 98.5 |
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Medaka (oryLat2): | Region #1:   chr11:22102103-22102366   Identity: 74.91%
   E-value: 7.2e-28   Bit-score: 123.7 |
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Stickleback (gasAcu1): | Region #1:   chrX:7537833-7538101   Identity: 72.46%
   E-value: 7.7e-27   Bit-score: 120.3 |
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Tetraodon (tetNig2): | Region #1:   chr21:2829330-2829622   Identity: 64.69%
   E-value: 1.4e-18   Bit-score: 92.6 |
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Zebrafish (danRer7): | Region #1:   chr19:35151107-35151369   Identity: 70.74%
   E-value: 6.2e-19   Bit-score: 94.8 |
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Lamprey (petMar1): |
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Ciona_intestinalis (ci2): |
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Sea_urchin (strPur2): |
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Lancelet (braFlo1): |
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