General information about the entry |
Entry location: | intergenic |
Position: | chr8:93517370-93517748  |
Length: | 379 nt |
Sequence: | RUNX1T1_Malcolm.fasta |
Upstream gene: | RUNX1T1 |
Downstream gene: | C8orf83 |
Paralogs: | |
Ultraconserved Genomic Regulatory Block (UGRB): |
RUNX1T1_cluster: chr8:92825131-94593284  |
External links: |
CONDOR database: | |
VISTA Enhancer Browser: | |
UCE (Bejerano et al. 2004): | |
Other browsers view: | [Ensembl]
[ECR browser]
[Ancora]
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Conservation in chicken: |
Chicken (galGal3): | Region: chr2:130053297-130053674        Identity: >95%
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Conservation in other species: |
Mouse (mm10): | Region #1:   chr4:13409351-13409726   Identity: 96.54%
   E-value: 1.1e-98   Bit-score: 365.5 |
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Armadillo (dasNov1): | Region #1:   scaffold_1254:25247-25447   Identity: 100%
   E-value: 1.4e-47   Bit-score: 195.9 |
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Opossum (monDom5): | Region #1:   chr3:355319363-355319739   Identity: 96.82%
   E-value: 3.6e-97   Bit-score: 361 |
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Platypus (ornAna1): | Region #1:   Ultra48:955458-955836   Identity: 95.51%
   E-value: 3.6e-93   Bit-score: 346.8 |
This UCNE has 1 paralogous region in Platypus
Paralog #1:   Contig252259:595-758   Identity: 84.76%
   E-value: 9.9e-18   Bit-score: 96.2 |
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Zebra_finch (taeGut1): | Region #1:   chr2:131654893-131655269   Identity: 96.55%
   E-value: 4.3e-94   Bit-score: 349.2 |
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Lizard (anoCar2): | Region #1:   chr4:18065089-18065459   Identity: 95.96%
   E-value: 1.7e-91   Bit-score: 341.1 |
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Painted_turtle (chrPic1): | Region #1:   JH584588:4395821-4396197   Identity: 96.82%
   E-value: 7.6e-95   Bit-score: 352.7 |
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Xenopus (xenTro3): | Region #1:   GL172732:1785143-1785518   Identity: 87.27%
   E-value: 6.2e-71   Bit-score: 272.5 |
This UCNE has 1 paralogous region in Xenopus
Paralog #1:   GL172732:1807520-1807729   Identity: 82.55%
   E-value: 4.7e-29   Bit-score: 133.4 |
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Fugu (fr2): |
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Medaka (oryLat2): |
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Stickleback (gasAcu1): |
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Tetraodon (tetNig2): |
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Zebrafish (danRer7): | Region #1:   chr19:34993889-34993973   Identity: 78.82%
   E-value: 0.000000083   Bit-score: 58.4 |
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Lamprey (petMar1): |
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Ciona_intestinalis (ci2): |
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Sea_urchin (strPur2): |
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Lancelet (braFlo1): |
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