UCNE: LHX2_Lucifer
(id = 35193)

General information about the entry
Entry location:intron
Position:chr9:126623636-126623893
Length:258 nt
Sequence:LHX2_Lucifer.fasta
Overlapping gene:DENND1A
Paralogs:
Ultraconserved Genomic Regulatory Block (UGRB): LHX2_cluster: chr9:126504530-127148256
External links:
CONDOR database:
VISTA Enhancer Browser:
UCE (Bejerano et al. 2004):
Other browsers view:[Ensembl] [ECR browser] [Ancora]
Conservation in chicken:
Chicken (galGal3): Region: chr17:9901388-9901645        Identity: >95%
Conservation in other species:
Mouse (mm10):
Region #1:   chr2:38221106-38221363   Identity: 100%    E-value: 1.2e-66   Bit-score: 258.5

Armadillo (dasNov1):
Region #1:   scaffold_14791:16077-16334   Identity: 99.22%    E-value: 3.1e-63   Bit-score: 247.4

Opossum (monDom5):
Region #1:   chr1:418077291-418077547   Identity: 94.55%    E-value: 5.7e-59   Bit-score: 233.5

Platypus (ornAna1):
Region #1:   Ultra134:386358-386614   Identity: 97.28%    E-value: 5.5e-66   Bit-score: 255.9

Zebra_finch (taeGut1):
Region #1:   chr17:10371486-10371742   Identity: 96.5%    E-value: 1.6e-62   Bit-score: 243.7
This UCNE has 1 paralogous region in Zebra_finch

Lizard (anoCar2):
Region #1:   chrUn_GL343966:93747-94031   Identity: 78.6%    E-value: 8.2e-41   Bit-score: 172.1

Painted_turtle (chrPic1):
Region #1:   JH584698:3457282-3457538   Identity: 96.11%    E-value: 1.1e-61   Bit-score: 242

Xenopus (xenTro3):
Region #1:   GL173041:815676-815920   Identity: 89.41%    E-value: 3.7e-48   Bit-score: 196.3

Fugu (fr2):
Region #1:   chrUn:299296161-299296423   Identity: 69.06%    E-value: 4.1e-24   Bit-score: 111

Medaka (oryLat2):
Region #1:   chr9:27517766-27518021   Identity: 70.11%    E-value: 1.1e-22   Bit-score: 106.4

Stickleback (gasAcu1):
Region #1:   chrXIII:568637-568890   Identity: 70.04%    E-value: 1.5e-23   Bit-score: 109.4

Tetraodon (tetNig2):
Region #1:   chrUn_random:23836761-23837013   Identity: 69.92%    E-value: 1.8e-24   Bit-score: 112.2

Zebrafish (danRer7):
Region #1:   chr8:3244005-3244262   Identity: 67.8%    E-value: 7.7e-21   Bit-score: 101.1

Lamprey (petMar1):
Ciona_intestinalis (ci2):
Sea_urchin (strPur2):
Lancelet (braFlo1):