General information about the entry |
Entry location: | intron |
Position: | chr9:128645994-128646517  |
Length: | 524 nt |
Sequence: | PBX3_Helen.fasta |
Overlapping gene: | PBX3 |
Paralogs: | chr1:164700923-164701054
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Ultraconserved Genomic Regulatory Block (UGRB): |
PBX3_cluster: chr9:128159800-129253379  |
External links: |
CONDOR database: | CRCNE00003216; |
VISTA Enhancer Browser: | |
UCE (Bejerano et al. 2004): | uc.278 http://users.soe.ucsc.edu/~jill/ultra.html |
Other browsers view: | [Ensembl]
[ECR browser]
[Ancora]
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Conservation in chicken: |
Chicken (galGal3): | Region: chr17:10504194-10504718        Identity: >95%This UCNE has 2 paralogous regions in Chicken
Paralog #1:   chr8:5455664-5455866   Identity: 70.1%
   E-value: 0.000000000058   Bit-score: 73.3 |
Paralog #2:   chrUn_random:1733794-1733955   Identity: 73.01%
   E-value: 0.000000000093   Bit-score: 72.6 |
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Conservation in other species: |
Mouse (mm10): | Region #1:   chr2:34256092-34256616   Identity: 96.95%
   E-value: 2e-119   Bit-score: 434.9 |
This UCNE has 1 paralogous region in Mouse
Paralog #1:   chr1:168269104-168269303   Identity: 70.65%
   E-value: 0.000000000042   Bit-score: 75.1 |
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Armadillo (dasNov1): | Region #1:   scaffold_18436:13871-14394   Identity: 97.9%
   E-value: 1.4e-108   Bit-score: 399 |
This UCNE has 1 paralogous region in Armadillo
Paralog #1:   scaffold_78:117750-117902   Identity: 74.03%
   E-value: 0.0000000082   Bit-score: 67.6 |
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Opossum (monDom5): | Region #1:   chr1:420827668-420828189   Identity: 96.95%
   E-value: 1.7e-110   Bit-score: 405.7 |
This UCNE has 1 paralogous region in Opossum
Paralog #1:   chr2:56044946-56045098   Identity: 74.68%
   E-value: 0.0000000015   Bit-score: 70.3 |
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Platypus (ornAna1): | Region #1:   Ultra39:5049083-5049607   Identity: 97.71%
   E-value: 1.5e-124   Bit-score: 451.4 |
This UCNE has 1 paralogous region in Platypus
Paralog #1:   Contig15817:1107-1273   Identity: 72.78%
   E-value: 0.000000000014   Bit-score: 76.2 |
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Zebra_finch (taeGut1): | Region #1:   chr17:10999620-11000143   Identity: 95.61%
   E-value: 2.9e-115   Bit-score: 420 |
This UCNE has 1 paralogous region in Zebra_finch
Paralog #1:   chr8_random:2417013-2417265   Identity: 66.41%
   E-value: 0.000000000021   Bit-score: 75 |
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Lizard (anoCar2): | Region #1:   chrUn_GL343535:108127-108662   Identity: 85.66%
   E-value: 1.8e-83   Bit-score: 314.9 |
This UCNE has 1 paralogous region in Lizard
Paralog #1:   chrUn_GL343405:777497-777646   Identity: 74.17%
   E-value: 0.00000000046   Bit-score: 71 |
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Painted_turtle (chrPic1): | Region #1:   JH584413:1543945-1544468   Identity: 96.18%
   E-value: 1e-114   Bit-score: 419.2 |
This UCNE has 2 paralogous regions in Painted_turtle
Paralog #1:   JH584467:1799975-1800129   Identity: 73.72%
   E-value: 0.00000000031   Bit-score: 72.1 |
Paralog #2:   JH584995:308891-308999   Identity: 75.86%
   E-value: 0.000094   Bit-score: 53.9 |
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Xenopus (xenTro3): | Region #1:   GL172958:297699-298131   Identity: 75.11%
   E-value: 7.5e-44   Bit-score: 183 |
This UCNE has 1 paralogous region in Xenopus
Paralog #1:   GL172721:1105219-1105368   Identity: 72.55%
   E-value: 0.0000000044   Bit-score: 67.5 |
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Fugu (fr2): | Region #1:   chrUn:55816886-55817200   Identity: 85.76%
   E-value: 2.5e-60   Bit-score: 232.4 |
This UCNE has 1 paralogous region in Fugu
Paralog #1:   chrUn:285224817-285224974   Identity: 68.1%
   E-value: 0.00000000011   Bit-score: 67.5 |
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Medaka (oryLat2): | Region #1:   chr9:18969997-18970344   Identity: 83.43%
   E-value: 5.9e-60   Bit-score: 231.2 |
This UCNE has 1 paralogous region in Medaka
Paralog #1:   chr17:25865529-25865714   Identity: 68.75%
   E-value: 0.0000000000019   Bit-score: 73.5 |
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Stickleback (gasAcu1): | Region #1:   chrXIII:13563906-13564211   Identity: 88.27%
   E-value: 3.9e-61   Bit-score: 235.3 |
This UCNE has 2 paralogous regions in Stickleback
Paralog #1:   chrIII:1395552-1395698   Identity: 72.85%
   E-value: 0.0000000000015   Bit-score: 73.8 |
Paralog #2:   chrVIII:2177157-2177299   Identity: 68.97%
   E-value: 0.000000066   Bit-score: 58.4 |
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Tetraodon (tetNig2): |
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Zebrafish (danRer7): | Region #1:   chr8:34827143-34827500   Identity: 78.06%
   E-value: 3.1e-38   Bit-score: 159.9 |
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Lamprey (petMar1): |
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Ciona_intestinalis (ci2): |
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Sea_urchin (strPur2): |
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Lancelet (braFlo1): |
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