General information about the entry |
Entry location: | intron |
Position: | chr9:135620086-135620348  |
Length: | 263 nt |
Sequence: | BARHL1_Juan.fasta |
Overlapping gene: | C9orf98 |
Paralogs: | chr1:90728868-90728999
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Ultraconserved Genomic Regulatory Block (UGRB): |
BARHL1_cluster: chr9:135495519-135745987  |
External links: |
CONDOR database: | |
VISTA Enhancer Browser: | |
UCE (Bejerano et al. 2004): | |
Other browsers view: | [Ensembl]
[ECR browser]
[Ancora]
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Conservation in chicken: |
Chicken (galGal3): | Region: chr17:7281790-7282054        Identity: >95%This UCNE has 1 paralogous region in Chicken
Paralog #1:   chr8:15577010-15577147   Identity: 70.42%
   E-value: 0.0000062   Bit-score: 55.6 |
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Conservation in other species: |
Mouse (mm10): | Region #1:   chr2:28798019-28798280   Identity: 96.2%
   E-value: 1.9e-52   Bit-score: 211.4 |
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Armadillo (dasNov1): | Region #1:   scaffold_170240:2187-2450   Identity: 96.97%
   E-value: 1e-48   Bit-score: 199.2 |
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Opossum (monDom5): | Region #1:   chr1:459816102-459816365   Identity: 96.97%
   E-value: 7.3e-50   Bit-score: 203.3 |
This UCNE has 1 paralogous region in Opossum
Paralog #1:   chr2:14322717-14322853   Identity: 70.21%
   E-value: 0.000043   Bit-score: 54.6 |
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Platypus (ornAna1): | Region #1:   Ultra81:228848-229127   Identity: 89.29%
   E-value: 3.3e-51   Bit-score: 206.9 |
This UCNE has 2 paralogous regions in Platypus
Paralog #1:   Contig83236:390-669   Identity: 88.93%
   E-value: 9.4e-51   Bit-score: 205.3 |
Paralog #2:   chr4:50137043-50137180   Identity: 69.01%
   E-value: 0.0000066   Bit-score: 56.4 |
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Zebra_finch (taeGut1): | Region #1:   chr17:7437640-7437904   Identity: 96.23%
   E-value: 9e-53   Bit-score: 211.4 |
This UCNE has 2 paralogous regions in Zebra_finch
Paralog #1:   chrUn:133559786-133559863   Identity: 93.67%
   E-value: 0.000000034   Bit-score: 63.3 |
Paralog #2:   chr8:11353718-11353855   Identity: 70.42%
   E-value: 0.0000047   Bit-score: 56.2 |
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Lizard (anoCar2): |
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Painted_turtle (chrPic1): | Region #1:   JH584612:52216-52480   Identity: 96.6%
   E-value: 3.5e-53   Bit-score: 213.8 |
This UCNE has 1 paralogous region in Painted_turtle
Paralog #1:   JH584690:2019242-2019379   Identity: 70.42%
   E-value: 0.0000061   Bit-score: 56.9 |
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Xenopus (xenTro3): | Region #1:   GL172827:331851-332105   Identity: 66.8%
   E-value: 0.00000000000046   Bit-score: 79.7 |
This UCNE has 1 paralogous region in Xenopus
Paralog #1:   GL173485:190238-190375   Identity: 70.42%
   E-value: 0.0000097   Bit-score: 55.4 |
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Fugu (fr2): | Region #1:   chrUn:307529777-307529878   Identity: 71.84%
   E-value: 0.0000014   Bit-score: 52.8 |
This UCNE has 1 paralogous region in Fugu
Paralog #1:   chrUn:396238498-396238625   Identity: 67.42%
   E-value: 0.00000041   Bit-score: 54.6 |
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Medaka (oryLat2): | This UCNE has 1 paralogous region in Medaka
Paralog #1:   chr4:5421827-5421964   Identity: 68.31%
   E-value: 0.000000066   Bit-score: 57.4 |
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Stickleback (gasAcu1): | This UCNE has 1 paralogous region in Stickleback
Paralog #1:   chrVIII:2689274-2689411   Identity: 67.61%
   E-value: 0.000000065   Bit-score: 57.4 |
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Tetraodon (tetNig2): | This UCNE has 1 paralogous region in Tetraodon
Paralog #1:   chr1:10155790-10155927   Identity: 67.61%
   E-value: 0.000000016   Bit-score: 59.2 |
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Zebrafish (danRer7): | Region #1:   chr5:31346025-31346149   Identity: 81.89%
   E-value: 0.000000000065   Bit-score: 68.2 |
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Lamprey (petMar1): |
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Ciona_intestinalis (ci2): |
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Sea_urchin (strPur2): |
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Lancelet (braFlo1): |
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